Clone UFO02814 Report

Search the DGRC for UFO02814

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:28
Well:14
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13189-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO02814.5prime Sequence

464 bp (394 high quality bases) assembled on 2009-02-18

> UFO02814.5prime
CAGTCGACATGATTCCAGGCTATGGACCCGTCACGCAGGCTCTGCTGGGC
ACCCTGCTTACCTGGGGACTGACCGCCGCTGGCGCCGCCCTAGTGATCTT
CGTCCGGGGTAACCAGCGGAGGTCTCTGGACGCCGCCCTGGGATTCGCAG
CTGGCGTAATGATAGCAGCCTCCTTTTGGTCACTCCTCAAGCCGGCCATC
GAAATGGCCGAGAGTTCCCATTTGTACGGAGTATACGCCTTTCTGCCCGT
CGCTGGAGGCTTCCTCTTGGGATCGATCTTCGTCTACGGATGCGACAAAT
TGATGTCATACCTGGGCCTTAACAGCACCAACATGATGATCCAGATGACG
CAATCAAAAGCCAGGGCGGACATAGCCATCGAGGGACTCTTAAGCCCAAT
GGGAGTGGCCCCCGATAGGTTGGCCTCAAGAGTCCTGGGAGGTTTCTCCC
ACTGCCCTTACCGT

UFO02814.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
Zip48C-RA 1878 CG13189-RA 446..890 9..456 2000 97.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11899962..11900379 9..429 1910 98.6 Plus
Blast to na_te.dros performed on 2014-11-28 21:08:46 has no hits.

UFO02814.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:19 Download gff for UFO02814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13189-RA 435..877 1..444 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:25 Download gff for UFO02814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13189-RA 437..879 1..444 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:01 Download gff for UFO02814.5prime
Subject Subject Range Query Range Percent Splice Strand
Zip48C-RA 437..879 1..444 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:01 Download gff for UFO02814.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11899953..11900395 1..444 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:25 Download gff for UFO02814.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7787458..7787900 1..444 96   Plus