UFO02818.5prime Sequence
1145 bp (1029 high quality bases) assembled on 2009-02-18
> UFO02818.5prime
CAGTCGACATGAGTGGCGGCACCATGCTATATGGCGGCGACGAGATCGGC
GCCCTGGTCTTCGATCCTGGACATCATTCCTTGCGAGTGGGCTACGCACA
GGAGGATTCGCCCAAGGCGGAGATACCCTCGGTTGTGGGGATTGGAGCAG
CTCCAGAGACCAATCTCGATCCGGAAACTAAAACAGACAACAATGCCACG
CCAAATAATGCTGACCAGCGCAAGTTCTATGTGGACACCAACTACGTGAC
CGTTCCCCGTTCCAATATGGAGGTGCAGACCTATATGAAAGACGGCATGA
TTGACAACTGGGACCTGTTTGAGAAGGTTATTGATTATGCCTACGCCAAT
GTCATTCAGTCGGAGCCGGAATACCATCCCGTGCTCTTTTCCGAGGCATC
GTGGAATGTCCGCAACAACCGCGAGAAGCTAACCGAGCTTATGTTCGAGA
AGTACAATGTTCCAGCCTTCTTTCTGGTAAAGAACGCCGTTCTGGCTGCC
TTCTCCAGCGGGCGGGCCACCGCTTTGGTTGTCGATAGTGGAGCCACCCA
CACCTCGGCCGTTCCCGTCCATGAGGGCTATGTCCTATCCCAGGCGGTGG
TTAAGTCACCCCTGGGTGGAGACTTCCTTTCACGACAGTGCCGCCAGCAT
CTGGAGAAGCACGGCATTGATCTGTCGCCGGTATACAAGATTGCCTCCAA
AGACGTTGTTAAGGAGCGCGACAACGGACGCTTCACGCTGCGCAAACTGC
CAGAGAACCTAACTCAGTCGTGGCAAAACTACATGTTGCAGCTCATGATG
CAAGACTTTCAGATGAATGTGCTGCAGTCCTAGAAATCCGTTCGACGAAC
GGGTTGCTGCTCAAATCCCGACGGTACACTATGAGTTTCCTAATGGTTAT
CATCAGACTTTGGCTCTGAGCGGTTCAGATAGCCGAGAGTCTTCTTTGAC
AATGCAATGCTGGGAGCTGGCCAATTGGCGTCCACCAGTGTGGGCATGTT
GTGATGCGATGTGCGGCTGTCACTTTTCGGCTCAGTTGTCGTTACTGGTG
GCAATACCCTCTCTGCAAGCTTTCGGAGCGCCCTAATCGCGGATTCTCCA
GCCTGCGTGCCCCTCAATACCGCGCTTAAAAATAGAGTCTGCAAT
UFO02818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bap55-RA | 1473 | CG6546-RA | 124..1250 | 9..1133 | 5225 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17429718..17430562 | 1049..208 | 3885 | 99.2 | Minus |
| 2R | 25286936 | 2R | 17430642..17430840 | 207..9 | 995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:49:46 has no hits.
UFO02818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:53 Download gff for
UFO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap55-RA | 96..1222 | 9..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:48 Download gff for
UFO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap55-RA | 124..1250 | 9..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:57 Download gff for
UFO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap55-RA | 124..1250 | 9..1133 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:57 Download gff for
UFO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17430642..17430840 | 9..207 | 100 | | Minus |
| 2R | 17429718..17430562 | 208..1049 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:48 Download gff for
UFO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13317223..13318067 | 208..1049 | 99 | <- | Minus |
| arm_2R | 13318147..13318345 | 9..207 | 100 | | Minus |
