UFO02827.5prime Sequence
1121 bp (1024 high quality bases) assembled on 2009-02-18
> UFO02827.5prime
CAGTCGACATGGGCGCCGAGCATTCGCAGCAGCGGGCTGAGGCCGATGGC
CACGAGATCTTCGACGGACGCCAGCCACCAGGAGCGGGCACTGGATCCCT
CGGCGATGGCAGCTCCATGATGCTGGCGGCCACGGCGGCGGCCAACAAAC
GACGCGGAGTTGGTCATCGCCAGCAGACGACAGGAGGAGCAGGCGGAACA
GTGGTGGGCCCGGGAGCTGGAGTGGGCCCAGCTAGCATTGTGATAGCTAG
CAAGCAGATCATCGCCGAGGCCGCTTCGCCCGGCGGCTCCGAACTGAGCA
GACCGCCTTCGCCGCCGCTTAGCGTCTGCTCCGACCTGCCATATGTGTCC
TATACAGATCGGCCAATCGGTGATTCGCCCAAGATACGCAGCAAGCCGGC
GCATATGCTCCAGCAGAGCAGCGCCAGCCGTGCGGCGGCCAGGAAGTCAC
ATCCGAGTGGACTCACCAGCGCCGTGAAACCGAAGCGACCACAGTCCACG
GCCTCTAGTCATAATATAGTGATTGTGCGTCCCGGTGCCATCGATGCTGG
CGAGGATGTGGACATGGACTTGGCACGATTGCGCAATATACCGCAGTTTC
TGCCCGTGCTCCGTGAATCCATCACGTCGGCGACCAATACACGAGATGCA
GAGATTCTGGAGCGACTAAACTCGCAGCATTTGATCAACATATGTACCCG
CATGCAAACACATCTTAATCTGTGCGCCAGCTATGTGGCCAGCGAACAGA
ATCACCTCGTGGAACGTACCAAGGTGGTGAGCAACTCGATCACCACCCTC
TTTGCCGGATTCGTGGACATGCAGAAGACGTACGCCTCGTACGCCGAGCA
ATTCGCCAAGATTCGGAGCATATCGCATCAGCTGAGCAGATGCAACTCGC
TGCTGCACGAGACATAGCCAGTCTGGAGCGATCAATACTTCCTGGACGAC
GAGACCGCCTGAGCCCTTCGTCTGGCGCACCGACGACACAGCTGGCGCGA
GCTGAGGCGCATCGGAGCAACAGCAGTCGCCTGGTGGCGCTGCAAGCTTT
CTGGACATCGTTGGCCGCGGTCCAGGGTAATGGGCTTAATCTAATCTAAT
CAAATCTAATTCCACTAGCCT
UFO02827.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11802-RA | 1481 | CG11802-RA | 234..1276 | 9..1039 | 4870 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11871562..11872546 | 988..9 | 4675 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:11:15 has no hits.
UFO02827.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:47 Download gff for
UFO02827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 233..1279 | 9..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:47 Download gff for
UFO02827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 234..1280 | 9..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:51 Download gff for
UFO02827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11802-RA | 234..1280 | 9..1042 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:51 Download gff for
UFO02827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11871509..11872546 | 9..1033 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:47 Download gff for
UFO02827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11765542..11766579 | 9..1033 | 98 | | Minus |
