UFO02829.5prime Sequence
1161 bp (1039 high quality bases) assembled on 2009-02-18
> UFO02829.5prime
CAGTCGACATGAGCGATGTCTACGAAGATCACTACCAGGTTCTGGGCTTA
CCGAGAAATGCCACCGACAGTGAGATTAAGGATGCTTTTCGGCGGCTGTC
CCTGCAATATCATCCCGACAAAAACGAGGATGGAGCGAAGGAGTTCCTTA
GAATCAACGAGGCCCATCGCGTCCTGATTGACCATCAGAGAAGGGCCTTG
TACGATTGCTGCTTCCAGTCCATGGACGTTGAAGCCATTATTCCCGCTGA
GAACGCTAATGGCCAACTGCCTGAATTGGGAAATCCATTCTTCCCAATGC
CACCCGAAACGCCGCCTGCTAGTTTTCGCGAAAAGCTCAAAGTTGCTGCC
TTCATCGGAGGCTTGCTGGTTGGTACATACGTGGGGTACCGGGTATTCCA
GAAACCGCCGCCATCTATCCCAGTTCCCCGGCCAATTCCAACGCAGGAAC
TAAGCGATTCGCATCTCGGATCCCTATGGACATTGTCCTCCGGGCTATTG
GCATTGAGATCGAAAAGAATACTGGGACTCGGCAAACTGGCGCCATGGGC
AAATACTCGAGTTTCTCCTAGGACTCTGAACGCGCCCTTTTCTTCGGCTG
CCAAAGTCGTGGCCAAAACAGTAATCCGAGGCCAAAGAGCCGTAGGTTCT
TCTGCAACTTCCAGTTCGTCCTTAGCATCGGCTGCGAACGTGGCTGTGAA
ATCCCTACCAAGCAAAGCTTCAGTGAATTCTGCTACGGAAACAGTCGCTA
AAACACTTTCCCAGGGATCACGAGCTGGACCATATTCAGCTTTGAAAACA
GTTTGGTCCTCAGCGGTTTCATATCTGCGCTCTCTTCTAAATTGGGCAAC
TACACCGAAATGGGGGAAGGCAACACCAGCAACCATTGCTGGTTTGGTTC
ATAACTCCAGACCAGTTTGGTCATCTGCAGCAAAAAATACCCTTGCTGCC
TTGATGTATGCATGCTCCAAAATATCTTCGTATTTGCGCGCTTTGGCGGG
CGCTTTATTAGTCCCACCTTTAGACGCCCTCCAAAGAACTACAATCTTTT
GAAGGAAGCTGAAAATGCAAGCTTTCTAGAACATTCGTTTGGCCCGCCGG
CCAGGTAGTTGTCATATCTAATCTAAATCATATCATAAATCCCACTAGCC
TAGGAATCTGG
UFO02829.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 188..1244 | 9..1065 | 5180 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073286..22074336 | 1060..9 | 5100 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:07 has no hits.
UFO02829.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:44 Download gff for
UFO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 187..1249 | 9..1070 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:44 Download gff for
UFO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1250 | 9..1070 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:45 Download gff for
UFO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1250 | 9..1070 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:45 Download gff for
UFO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073286..22074336 | 9..1060 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:44 Download gff for
UFO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066386..22067436 | 9..1060 | 99 | | Minus |
