UFO02841.5prime Sequence
1147 bp (1046 high quality bases) assembled on 2009-02-18
> UFO02841.5prime
CAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGCAGCACGGA
GTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCCAATGGTGG
CAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGATGAAGCTGC
GCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTACGCGAACGC
TACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAACACCTGTC
GCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACATCCAGCCGC
GCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCACAGTCCGCC
AACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAATGGCTCCAT
GAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCTTTACCACC
AGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTGCTGCATCT
GCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGACCAGGTGTT
CAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCACATATCAC
AGTCACAAATGCAGCAACAGGCGGCGGCCGTTGCAGCTGTAATGGCTGAT
TCCTCGCAAGGTTATCAGGATCAATACAAGGATGGCTCCGTGGGCATGAA
CGGGGCCCAGAACAGCGCTGGCAGTCTGACCTCAACATCATCCTCGATGA
AATCACCGCTGTCGTCGCCGCTGCAAGGAATTGGGGCAGGATCCCATCAT
CCTCAGCAGCAGACGCAACAACAACAGCAGCAGCAGCAGCAACAAGCGCA
GCAACAGTCGCCGGCATCTGAACAGCAGCTTCCGGTGGTACATTCCTCTT
CCAGCGCCACGGGCGCTTCCATCGGCAACAGTTCCACTCTGCAGATGCAA
CAGTCACATGTCTATAACCCCAAGGCGATGGTCTAGACTCTTCGTCATCG
AGCCATTTCCATATGAAGAACCCCGTATTCCACTAAATGGCATGCCCATA
ACCAGATGAACCAGCAATGGTTAGTCCCCTTGGCATGACTCGGACGGACG
ATCGATGAGAACGCCATGAATCTGGATGGGAGGCTGCCAGGCTATGT
UFO02841.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..1183 | 9..1119 | 5295 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11309069 | 159..1071 | 4365 | 99.5 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 9..159 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:19:04 has no hits.
UFO02841.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:35 Download gff for
UFO02841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 64..1188 | 9..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:42 Download gff for
UFO02841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1193 | 9..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:44 Download gff for
UFO02841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1193 | 9..1132 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:44 Download gff for
UFO02841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 9..159 | 100 | -> | Plus |
| 2R | 11308156..11309098 | 160..1101 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:42 Download gff for
UFO02841.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 9..159 | 100 | -> | Plus |
| arm_2R | 7195661..7196603 | 160..1101 | 98 | <- | Plus |
