UFO02847.5prime Sequence
1104 bp (986 high quality bases) assembled on 2009-02-18
> UFO02847.5prime
CAGTCGACATGTGGCGGCCGAGTATCTCGAATTGCGTGTGGAGCACCCTG
CTCCTGGCCATTTTTGTGCAGCAAACGCTAGCACAGCGAACCCCGACCAT
ATCCTACATCACGCAGGAGCAGATCAAGGATATCGGCGGCACAGTGGAGT
TCGATTGCTCCGTCCAGTATGCCAAAGAGTACAACGTGCTGTTCCTGAAG
ACGGACAGCGATCCCGTCTTCCTCTCCACGGGCTCCACGCTGGTCATCAA
GGATTCGCGCTTCTCGCTGCGGTACGATCCCAACTCGTCCACCTACAAGC
TGCAGATCAAGGACATTCAGGAGACGGACGCGGGCACCTACACCTGCCAG
GTGGTGATCTCCACCGTTCACAAAGTGAGCGCCGAAGTGAAGCTATCGGT
GCGCCGTCCCCCCGTCATCTCGGACAACTCCACGCAGTCGGTGGTGGCCA
GCGAGGGCAGCGAGGTCCAGATGGAGTGCTACGCCAGCGGCTATCCCACA
CCCACCATCACCTGGAGGCGCGAGAACAATGCCATTCTGCCAACTGATAG
TGCCACCTATGTGGGCAACACCCTGCGCATCAAGTCAGTGAAGAAGGAGG
ATCGCGGCACCTACTACTGCGTGGCCGACAATGGAGTGAGCAAGGGCGAC
AGGCGCAATATCAACGTGGAGGTGGAGTTCGCACCAGTGATCACCGTGCC
GCGTCCTCGTTTGGGACAGGCTCTGCAGTACGACATGGACTTGGAGTGCC
ACATTGAGGCCTATCCGCCACCGGCCATTGTGTGGACCAAGGACGACATC
CAGCTGGCCAACAACCAGCACTACAGCATCTCGCACTTCGCCACCGCCGA
CGAGTATACCGACTCGACGCTCCGTGTGATCACCGTTGAGAAGCGCCAGT
ACGGAGATTATGTGTGCAAGGCCACCAATCGCTTTGGAGAGGCGGAGCGC
GCGTCAATCTTCTTCGAGACGATCATTCCGTGTGCCACGGCCTGGGGACA
GGCGTACATCGCGGGCCGAGATGTGTCCGCCCACTTTCGTCGCTCTTGTG
GCATTCTTGGCGGGGGTTGTCTCTCCACGAGCAAGCCTTCTAGAACATCG
GTTG
UFO02847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lac-RA | 2156 | CG12369-RA | 328..1375 | 9..1051 | 4965 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12453517..12454054 | 9..546 | 2690 | 100 | Plus |
2R | 25286936 | 2R | 12464339..12464808 | 546..1012 | 2110 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:27:48 has no hits.
UFO02847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:38 Download gff for
UFO02847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lac-RA | 327..1391 | 9..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:01 Download gff for
UFO02847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lac-RA | 328..1392 | 9..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:15 Download gff for
UFO02847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lac-RA | 328..1392 | 9..1069 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:15 Download gff for
UFO02847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12453517..12454054 | 9..546 | 100 | -> | Plus |
2R | 12464340..12464866 | 547..1069 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:01 Download gff for
UFO02847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8341022..8341559 | 9..546 | 100 | -> | Plus |
arm_2R | 8351845..8352371 | 547..1069 | 96 | | Plus |