UFO02855.5prime Sequence
1129 bp (1033 high quality bases) assembled on 2009-02-18
> UFO02855.5prime
CAGTCGACATGGTCAAACTATTCGCGTTGAGCATCTTTCACAAGGGCGCC
AGCGAGGCGCGTCTCCTGAAGACCGCCTCGGACCTGCAGTCCTTCTCCTT
TTTCCAACGTGGCACCGTCAACGAGTTCATGACTTTCGCTTCGAAGACGA
TTGTGGAGCGCACACAGCCGGCCCTGCGGCAATCGGTGAAACAGGATGCC
TACATGTGTCATGTCTATGTGCGGGCGGACAATCTGGCCGGTGTACTGAT
CGCCGATCATGAGTATCCGCATCGCGTGGCGCACACGCTTATCACAAAGA
TTCTGGATGACTTTACGGCCAAGGTGTCGGCCGATCAGTGGCCCAATGGC
ACGGAGGCCACTATCTCATTTGACTTGCTGCCAGCGTTTCTAGCACGCTA
TCAAAATCCCGTCGAAGCAGATCCGCTGACGAAAATGCAAAACGACCTGG
ACGAAACGAAGATCATACTGAAGAATACCATCGAGGCGGTGCTGGAGCGG
GGCGAGAAGCTGGACGACATGGTCAGCAAGTCGGAGAAATTGTCGCTGCA
GAGCAAGGCGTTCTACAAGACGGCGAAAAAGACTAACTCCTGCTGCAGCT
TCACCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGACTGATCGGCAGCGGCATCAGCAC
TTGTCGCTTGCGTATAATATTTGGCCATGGTGAAACGGGGCGAGAGTGTC
ATATGGCCACGTTTAATCAAAACTGGGTGAACTCACCCAGGGATGGCTGA
AACGAAAACTTTCTCAATAACGTTAGGGAATAGGCCAGGTTTCACGTAAC
GCCCCATCTTGGCAATTATTGGTAACTGC
UFO02855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ykt6-RA | 1469 | CG1515-RA | 268..864 | 9..605 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7920890..7921361 | 134..605 | 2360 | 100 | Plus |
| X | 23542271 | X | 7920676..7920800 | 9..133 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:39 has no hits.
UFO02855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:25 Download gff for
UFO02855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0155-RA | 208..812 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:55 Download gff for
UFO02855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ykt6-RA | 260..864 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:13 Download gff for
UFO02855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ykt6-RA | 260..864 | 1..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:13 Download gff for
UFO02855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7920668..7920800 | 1..133 | 97 | -> | Plus |
| X | 7920890..7921361 | 134..605 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:55 Download gff for
UFO02855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7814701..7814833 | 1..133 | 97 | -> | Plus |
| arm_X | 7814923..7815394 | 134..605 | 100 | == | Plus |
