UFO02857.5prime Sequence
1111 bp (998 high quality bases) assembled on 2009-02-18
> UFO02857.5prime
CAGTCGACATGAAAGACACCGAGGTCAACGACAACACCACAGAGGAGGAG
CCCGTGAAGGAGGCACCTGAGGTGCCGGCCAATTCCAGCTCCGACGAAGA
TGAGTACGATGACATAGATGACGATGATGAGCCAATGGACGAAGGCGATG
AGCTAACCACTTGTCTGTTTTGCACCGAAACATCTGCAAACATCTCGGTG
GCCATTGACCATCTTGACGCCCGGCATAAAGTGAATCTGTCCCAGCTTCA
GCGTAAATTCGAAATGGACCAGTATTCCTTTATCAAACTGATAAACTACA
TAAGAGCCAAAAAGATCAGTGCCGAGCAGTTATTGTCTGCGGAACATCCG
CTTTGGCAGGATGAGAAGTACCTCCAGCCCGGGGAGTATGAGCCCTGGCT
CTGCTATGACTACGAAGTCCTTAAAACAGACGGCGCTCCGACGCAGCCCT
CGGTTCTGGAGCTACAACAGCGGATTGCTGAGCAGTCGCAATTGCTGCAG
CAGGCCAACGAGGACATGGAACGCATGCGCAACGACTACAAGGCGCTGCT
GCAAAAGGTACATGCTGACGGCGAGCCCAAAGGTTCCGACCAGAGCGTAC
CGCGTAACAACGTTTGTCTCGACAACGAATACTTCAAAAGCTACGCCCAC
TTTGGCATTCACCATGAAATGCTCAGCGACAAGGTGCGGACCAGCACCTA
TCGCGCGTCTTTGCTCCAAAACGAGGCCGTTGTTCGGGGCAAGACAGTGT
TGGATGTGGGATGCGGCACGGGAATCCTATCCATCTTCGCCTCCAAAGCG
GGTGCAGCTCGCGTTGTCGGCATAGATAACTCGGACATTGTGTACACCGC
CATGGATATCATCAGAAGATCATGTTGAGAATGTGACTGATCAAGGGACG
GCTGGAGGACACTGATCTCCCAGAGACTAATACGACATGATATATCCGAT
GGATGGGCTATTTTCTTTTGTACGATCAATGCTGGACAGCATTATCTACG
CCCGCGACATCACCTCAACCCAATGGCATAATACTGCCAGTCCTGTACCT
CAGTCTCTTGGGCTATGGAGACACCGCTTTATGCCCATGATGGATCTGGC
TAACGTACAGG
UFO02857.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art3-RA | 1740 | CG6563-RA | 143..1240 | 8..1090 | 5025 | 98.1 | Plus |
| Art3-RB | 1804 | CG6563-RB | 229..1304 | 30..1090 | 4915 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15228125..15229180 | 1072..30 | 4575 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:08:49 has no hits.
UFO02857.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:23 Download gff for
UFO02857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 167..1271 | 1..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:30 Download gff for
UFO02857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 136..1240 | 1..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:17 Download gff for
UFO02857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 136..1240 | 1..1090 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:17 Download gff for
UFO02857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15228105..15229179 | 31..1090 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:30 Download gff for
UFO02857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11053827..11054901 | 31..1090 | 98 | <- | Minus |
