UFO02858.5prime Sequence
1130 bp (1034 high quality bases) assembled on 2009-02-18
> UFO02858.5prime
CAGTCGACATGGAAGGCGACGCGGAAAATCGCAAGGATCAAATCCTCGAG
CGTTTGAACAAAAGAAACAAGGACAGGCAAAACTATTTGGATGTGAAATC
GGAGCTGCGTTCCAAGGAAACAGTGCAGAACGAGGGCGTTGACTACTTCT
ACCAGACTTTCAGCCAAAAAACCATGGATATAGAGCAGCGATTAAAGGAT
GTGCAGTGCGGCGATGGCCAGCCAACCGATTTGGCCAGAAACTTCGCCGA
CATAACTGTGGAGATCCAGGATCTGCAGCGATATCTCACCGCATCCACCA
TGTTTCTGCCCGACTTCAAGATCAAATCCTGTCAGAATATCCTTAACACC
CTGACCGCCGTCAGTGATGAAACCCGCCAGCGCCTGTTGCCCAAGAAAAA
GTTTGGTTTCAGTGGCAAAAAGACCGTCACAAAGCCAAAAGTCCCTCCAA
ATAAGGATATAGTCGACGCGAAACTCAGTAAAGTCCCAGAAAAACTAGGC
TCCAATTTCACGTGGACGATTGCCAATCGAACGAACGAGCATATAGTCCT
GGATTCCGCTAAAGTCAATGGCCAGGACATCACAATATCGAAACTGAACC
ACTGTTTGGTTGAACTGCAGGGTCATCCCGGTTCTGTGCAGGTTTCCAGG
GCCTCCAAATGCACGCTGCTATGCGGCCCCATCGCACGCTCCTTCTTCGC
CGAGAATCTCGAGGATTGCACCCTCTCCATTGCCTGCCAGCAGTTGAGGT
TGCACTCCTCCCGGTCCATTCGCATATACATGCATGTCACCTGCCGCGCA
ATAATCGAGGATTGCAAGAGTATTGAGATCGGAGAGTACAACTACGATTA
TTCCAAACTGGAGGCCGACTACCTAGCTTCTGGACTGAATAAGCACAGAA
CAACTATACGGATGTGGCCGATTTTAACTGGCTTTCGCCGGATGTCCCTC
GCCGACTGGAGCCTCCTCAAGGATTATCCCGATCCGAATTGGAACGCCTT
AAGGCGCGACTTTTTGCCATACCATAACAGCGACTTAGCAGATGTTCAAG
ACTATTCATCATGCAGCTTCTAGAAACATTCGTTGGCGCGCGGCCCAGGT
ATGGCATAATCTAATCTAACCAACCATATA
UFO02858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31961-RB | 1477 | CG31961-RB | 243..1307 | 8..1062 | 5015 | 98.8 | Plus |
| CG31961-RA | 1333 | CG31961-RA | 99..1163 | 8..1062 | 5015 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4186476..4187484 | 1013..8 | 4895 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:08:55 has no hits.
UFO02858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:31 Download gff for
UFO02858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RB | 239..1289 | 8..1050 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:32 Download gff for
UFO02858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 99..1149 | 8..1050 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:19 Download gff for
UFO02858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 99..1149 | 8..1050 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:19 Download gff for
UFO02858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4186434..4187484 | 8..1050 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:32 Download gff for
UFO02858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4186434..4187484 | 8..1050 | 99 | | Minus |
