UFO02859.5prime Sequence
1111 bp (1016 high quality bases) assembled on 2009-02-18
> UFO02859.5prime
CAGTCGACATGACGGAGCTGGGCATGGAGCTGGAGAGCGTTCGCCTGGCG
ACATTTGGGGAATGGCCCCTGAATGCCCCAGTTTCCGCGGAGGATCTGGT
CGCCAATGGTTTCTTTGCCACGGGAAACTGGCTGGAGGCCGAGTGCCATT
TCTGCCACGTGCGCATCGACCGCTGGGAATACGGCGATCAAGTGGCGGAG
CGCCATCGCCGCTCCTCGCCCATCTGCTCCATGGTTCTGGCTCCCAATCA
CTGCGGCAATGTTCCCAGGAGCCAGGAGAGCGACAACGAGGGAAACAGCG
TAGTGGACAGCCCGGAGTCCTGCTCTTGTCCCGATCTCTTGTTGGAGGCC
AATCGCTTGGTAACTTTCAAGGACTGGCCGAATCCCAACATCACGCCGCA
GGCTCTGGCAAAGGCAGGTTTCTACTACCTGAACCGTCTGGATCACGTGA
AGTGTGTTTGGTGCAACGGAGTGATTGCCAAGTGGGAGAAGAACGACAAT
GCCTTTGAAGAGCACAAGCGCTTTTTTCCCCAATGTCCTCGTGTGCAAAT
GGGCCCCCTTATAGAGTTTGCCACCGGGAAGAACCTGGATGAGCTGGGCA
TCCAGCCCACCACTCTGCCACTGCGTCCCAAGTACGCCTGCGTGGACGCC
AGATTGAGAACCTTCACCGATTGGCCCATTTCCAATATTCAGCCCGCTTC
GGCTTTGGCGCAGGCTGGCCTATATTATCAGAAAATAGGCGACCAGGTGC
GCTGTTTCCACTGCAACATTGGATTGCGCTCCTGGCAGAAAGAGGACGAG
CCGTGGTTCGAACACGCCAAGTGGTCGCCAAAGTGTCAGTTCGTTTTGCT
GGCCAAGGGTCCAGCCTATGTAAGCGAAGTGCTCGCGACAACAGCTGCCA
ACGCCAGTTCCCAGCCAGCAACTGCTCCGGCTCCAACGCCCCAAGCAGAC
GTACTGATGGATGAGCTCCGGCCAAGGAGGCCCTAGCCTTGGGTATCGGA
TGGAGGAGTTGTGGCGCAATCCATCCAGCGCAGCTCTTGAGATTCCGGCT
GCGCTTTCCCTCAGTTGGACAAAACTATTGGCATGACATCCTTTGACAAA
ATGCGGCGCCA
UFO02859.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 39..1124 | 9..1097 | 5145 | 98.6 | Plus |
| Diap2-RA | 2106 | CG8293-RA | 148..1233 | 9..1097 | 5145 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15933130..15933820 | 1070..380 | 3100 | 97.8 | Minus |
| 2R | 25286936 | 2R | 15934199..15934570 | 380..9 | 1860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:27:40 has no hits.
UFO02859.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:30 Download gff for
UFO02859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RB | 32..1109 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:58 Download gff for
UFO02859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 141..1218 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:11 Download gff for
UFO02859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 141..1218 | 1..1080 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:11 Download gff for
UFO02859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15933121..15933819 | 381..1080 | 98 | <- | Minus |
| 2R | 15934199..15934574 | 1..380 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:58 Download gff for
UFO02859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11820626..11821324 | 381..1080 | 98 | <- | Minus |
| arm_2R | 11821704..11822079 | 1..380 | 98 | | Minus |
