UFO02862.5prime Sequence
1127 bp (1041 high quality bases) assembled on 2009-02-18
> UFO02862.5prime
CAGTCGACATGAGCACGGGCATTGGCAGCAGCAGCAGCAGCACGGAGGAG
CAGCAGCACCTGGAACTGAGCGCGGACTTGGAGGCGTGCTCCCTGCTTGG
CCCGCAGGACCCGTCGAACGTCGATACCGGCAGGACACGCGCTAAGCAGC
GACTCAGCTTGAACGGAAAGCGGCGCCGCAGCCGGATGTCGCGCAGGGCC
AATCTGATCGGCATCTGCGGCGTGAGCAGCCTGTGCATCCTGCTGCTGAT
CGCCACCACCCAGCACCGTCCGCTGACCACGCCGTTTAATCAGTCGGCTG
GGCGGGATCAGGGCGCGTCCGTAGATGGCGGTCCATCCAATTCGCTGGCG
CGCAGCGCCTTCTACGATCGCTTCCAGCAGCAATTGCAGCAGCAGCAGCA
GTCGTCGCAGACGGCCGTCTACAATCTGACAGCTACTATAGTGGATGTCC
TGTCGGCTCAACGGTCGCGCATCCTGGCCGAAATGGAGAACTTCGAGTAT
CCGCGCGGCGGCGCCGAGCGTCTGACGGACATGACGCCGGAGACGAACGG
CACCCCGGTGCGCAGTGTGGTGGTCACCTCATGGCGCTCCGGCTCCACCT
TCCTGGGTGACATTCTCAACTCGATACCGGGCAACTTCTATCACTATGAG
CCGCTGCTCGACTTCGGCATCAAGCAGATCCGCGATCCTGACGATCAGGA
GCTGGCCGTGCAGAACCTGAAGAACCTGCTCAACTGCGACTACGCCGACA
TGATCGACTATCTGAACTTCGGCAAGACGCACACCTATCTGTTCGAGCAC
AACACCCGACTGTGGGACGTCTGCCGGGAGTTCCCGCGCTTCTGCTGGCG
TCCAGCCTTCCTCACGCGCTTCTGCCGCCTCTTCCCCATCCAGAGCATGA
AGACCGTCCGCCTGCGACTCGCCCAGGCCGAAAAGCTGCTCGAGGACCAA
GTCTCTCAGCGTGCGATCGTGCTGCTGGTGCGAGATCCACGAGTACGATG
CAGTCGAGCGACATCGAGTGTGTGCGAGGCCACGAGGACTGCCAGGATCC
ACGACTGGTGTGCCAGATCTTGCGATGACTTACAAGAACAGGCGATGCTT
GTTTGCTGAATATCCGTCTCGTTTAGG
UFO02862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31637-RB | 2595 | CG31637-RB | 230..1353 | 9..1124 | 5165 | 98 | Plus |
| CG31637-RA | 2672 | CG31637-RA | 230..1353 | 9..1124 | 5165 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6498876..6499817 | 9..950 | 4710 | 100 | Plus |
| 2L | 23513712 | 2L | 6525383..6525488 | 965..1066 | 300 | 94.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:11:03 has no hits.
UFO02862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:36 Download gff for
UFO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 228..1362 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:12 Download gff for
UFO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 223..1357 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:31 Download gff for
UFO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 223..1357 | 1..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:31 Download gff for
UFO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6498869..6499819 | 1..951 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:12 Download gff for
UFO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6498869..6499819 | 1..951 | 99 | -> | Plus |
