UFO02867.5prime Sequence
1169 bp (1022 high quality bases) assembled on 2009-02-18
> UFO02867.5prime
CAGTCGACATGGCTCGGAAACGAAAGATTCCCGTGCGCAAGCACCACGGC
GTCCGTGATCCCCTCAAGCAGCTGGAACAGAAGGAGAAGAAACTTTCCAA
AGTAACGAACAATCCGCCTGTGAAAAAGGATGAGCAGCAGGTGTCCTTTA
AGTTCCGTCAGTTTCAGCAGCTTGCCAACGCCACCAAATCGGGCAAGAAG
CTAAGATTGGGCGAAATTGGACGGGAGGATAAGCCCAAATCCTCTCCAGG
ATCCAAGCCTGGCAGTAGTTCCTCCTCAAAGGAAACGCGTAACATCAAGC
AGTTCGCCAACGAAACGGACGAGGATTATCTGCGCCGAGTGAATCGCATG
ACCAATGCATCCGTACGGGAAGCCCACTACGAGGCCAAGTATGGTGTGAA
CGTGATCAGAAACCCCAAAACCGGGGAGATTACTGTCCAAAAGAGGCCGA
AAAACGAGATCGACGAGCTGCTCAAGCAGAAGCAAAAGGAGCAACGGCTG
GCGGGCAAAAGGGGTCGCAAAAAGGTTCAAGTCGTACACAAGCCCATGGA
TGCGAAGACCAGTCGCGAATTGGTGAAGAGGGCCTACAAGGAGGCCCAGC
AAGAGGTTGATACCGAGGAGAAGCAGAATGCCGGGCCAACAGAATTCAAA
CAGGATGCTGTGGCATTTGGTGAGATCGTCCATGCCCCACCTTCCCTCAA
AATCCTGCCGCGCAAAGCGGAAAAAAGTGAAACCGTGCCGCGTCCAGGAC
GCAAAGCCAATCTCCTTCTAAAGTCCATGCTGAATCCCGACCAGGGTCAG
TCAAATCGTGGGCCGGAGGACGACGACAGCAGTCGACTAAAGCTGGCTGC
CCAATCTAAGAGCGCCTTCAAAGCACCCACCAAGGCCCAGATGATGGGCA
AGCGGAAAGATCTGCCCTTGGCTACGAGGTCAATGCTTGAAACCGAGCGC
AGCAAATGGTTCAGCTATACCGTCAGCTCAAAAACAGACAACAGCAGATT
CGCAAGCTTTCTAGACCATTCGTTGGGCCGCGGGCCAGGTAAGGTGTCAT
AATCATATCATATCATATCTAATCCACACTAGGCTAGGAGATTCTGTCAT
GACATAGTGCTTGATTCTCACAATAAAGCCGGCACGACGCGCTTCTGAAC
AATCGATGATTCTGAGGTC
UFO02867.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8326-RA | 1260 | CG8326-RA | 70..1064 | 9..1001 | 4910 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17628360..17629271 | 1001..92 | 4445 | 99.7 | Minus |
| X | 23542271 | X | 17629341..17629423 | 91..9 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:07:07 has no hits.
UFO02867.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:05 Download gff for
UFO02867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8326-RA | 54..1048 | 9..1001 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:16 Download gff for
UFO02867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8326-RA | 70..1064 | 9..1001 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:07 Download gff for
UFO02867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8326-RA | 70..1064 | 9..1001 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:07 Download gff for
UFO02867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17628360..17629271 | 92..1001 | 99 | <- | Minus |
| X | 17629341..17629423 | 9..91 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:16 Download gff for
UFO02867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17522393..17523304 | 92..1001 | 99 | <- | Minus |
| arm_X | 17523374..17523456 | 9..91 | 100 | | Minus |
