UFO02875.5prime Sequence
1156 bp (1051 high quality bases) assembled on 2009-02-18
> UFO02875.5prime
CAGTCGACATGCTGACGACGTCTTCAAGCACAATGCTTGGTAAATATGGG
TGGCAAATCCTCCGGAGATTGGCCAGCAAAAGTTGGGAACACACTCGCCA
GCGTAAAAAACCGTCGGGAGCGGGCAGCCGGGTGCTCACCGACGCGCGAG
AGGTGTTCGAGTTTAACGCCTGGGACCACGTGCAATGGGATGAAGAGCAG
GAACTGGCCGCGAAGGCGGCTGTAGCCAAGAATTCGACCTCAAAGATGGA
AGCGGAGCAGAAGGAGCGATTTCAGACAGACGCCCCCAAGTTTTGGGATT
CCTTCTACGGCATTCACGACAACCGCTTCTTCAAGGATCGCCACTGGCTG
TTTACGGAGTTCCCCGAACTAGCTCCTCTGGCGGCGGATTCGGCGGTACT
GCAACCACGTAGCATTTTCGAACTGGGCTGTGGAGTAGGAAACACAATTT
TACCCCTTCTACAGTACAGCTCTGAACCGCAGCTCAAGGTTTTCGGATGT
GACTTCTCCGCCCGGGCCATTGAAATCCTGCGAAGCCAACGGCAGTTCGA
CGAGAAGCGCTGCGAGGTGTTTGTCATGGATGCCACGCTGGATCATTGGC
AGGTGCCCTTCGAGGAAAACTCACAGGACATTATTGTGATGATTTTTGTG
CTGTCCGCAATTGAGCCAAAGAAAATGCAGCGGGTATTGGACAATTGCTA
TCGCTACCTGCGTCCCGGTGGCTTGCTCCTCTTCCGCGACTACGGACGAT
ACGACCTGGCACAGCTGCGCTTCAAGAGCGGCAAGTGTATGGAGGACAAC
TTCTACGTGCGAGGCGACGGCACCATGGTGTACTTCTTCACGGAGGAGAA
CTGCGGGGTATGATGACTCAAGCGGGGCTGCAGGAGGAGCAGCTCATTGT
GGACCGAAGACTGCAGTTAATCGCTGTCGCGGCTTGAAATGTACCGCGTG
TGGATTCAGACAAGTTCAGAAACCGCTTGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAGTGGTCCTATCATAATCATAATCTAATCAT
AATCCCCACTAGCCTAGAGAGATCTGGTCATGACTAGTGCTTGGATTCTC
TACCAATTAAAAACGCCCGGCGGCACCGGAGCGTCTGACAAACTCGAAGG
ATCTGA
UFO02875.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| metl-RB | 1240 | CG13929-RB | 164..1138 | 9..978 | 4750 | 99.5 | Plus |
| metl-RA | 1107 | CG13929-RA | 193..1005 | 171..978 | 3940 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1638061..1638855 | 963..172 | 3825 | 99.6 | Minus |
| 3L | 28110227 | 3L | 1638908..1639072 | 173..9 | 825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:23:59 has no hits.
UFO02875.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:31 Download gff for
UFO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RB | 155..1137 | 1..982 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:45 Download gff for
UFO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RB | 159..1141 | 1..982 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:11 Download gff for
UFO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RB | 159..1141 | 1..982 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:11 Download gff for
UFO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1638061..1638854 | 173..963 | 99 | <- | Minus |
| 3L | 1638909..1639077 | 1..172 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:45 Download gff for
UFO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1638909..1639077 | 1..172 | 97 | | Minus |
| arm_3L | 1638061..1638854 | 173..963 | 99 | <- | Minus |
