UFO02877.5prime Sequence
956 bp (395 high quality bases) assembled on 2009-02-18
> UFO02877.5prime
CAATCCACATGTCCAAGTCAAGCGCACCAGGCTGGGGAAAATTCTTCAAT
GCGGCCGGCATCCCATCTCCTGCGGCTGCCGGCTATGCCCACGTCTTCGT
GGATAACCGCATCCAGGACGACGTGCTGTTGGATCTTAACAAGGAGTATC
TCCGGGAAATGGGCATAACCTTGATGGGCGATATGATCGCCTTCCTGCGG
CACTCAAAGACCGTCTGCAAACAGAATGCCCGGGAACAGGTCCTCGCAAC
GGATGTGGTTCAATCAGTTGTCCAACCGGTATCGCCAAAACCCAAAGCGC
CGGTTGCAACTCCAAAAGCAAAGGTTTATCCGCCTGCGAAACCTGCAAGA
CGGGTGCTTCCGGAGCACGAGGGCGAGTACAAGGTGACTCTGCCCTCGGG
AACCACCGAGCGCAGCAAACAGATCTTAGCCAAGCGGGAAAAATTATACT
CCGATCGTGTGAGCAGCTCCAAAAAGTCGGACATATTTACGCGCCTGCAT
GCCGAGGACGAGGCGCAAGAGGGCATTGTCTCCAGTTCGGGCGAGAGCAG
CGTCCGCGTGCACGTTGCCGGCGCATCAAAAACAGCGGCCACCTCCAGCA
ATAATTCGGTCTTCGCTCGACTCGGTGGCAAGCAAGGCGCTCTTCCTGAG
GAGTTCACTTCCACCAGTGAAATCATATCGATCCTTAAAAACACACACCG
TACAGTTGGTGGTGGAGGAGGAAGGAGGAGGTATTTGATGTATAGTGCCC
TTGACTAAAGATCATAATCAGGCCTACCACATTTGTAGAGGTGTTACGTG
CTTTAAAAACCGCCCCTTCCTCCCCGTGACATGAAGATTAAATGAGTGCA
TTTGTTGTTGTTAACTTGTTTTTTGCAGCTTATATGCTAAATATTAAAGC
ATAGCATCGACGAATTTATCGATATAAATGCATTTCTTTCACTGACGTTC
TGGTTG
UFO02877.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16812-RA | 1721 | CG16812-RA | 143..864 | 9..731 | 3305 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13222875..13223288 | 31..444 | 1905 | 97.3 | Plus |
| 2L | 23513712 | 2L | 13223345..13223622 | 445..722 | 1300 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:12:20 has no hits.
UFO02877.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:02 Download gff for
UFO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16812-RA | 165..890 | 1..731 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:06 Download gff for
UFO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16812-RA | 139..864 | 1..731 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:38 Download gff for
UFO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16812-RA | 139..864 | 1..731 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:38 Download gff for
UFO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13222872..13223288 | 28..444 | 97 | -> | Plus |
| 2L | 13223345..13223631 | 445..731 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:06 Download gff for
UFO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13222872..13223288 | 28..444 | 97 | -> | Plus |
| arm_2L | 13223345..13223631 | 445..731 | 97 | -> | Plus |
