UFO02883.5prime Sequence
1087 bp (927 high quality bases) assembled on 2009-01-24
> UFO02883.5prime
CAGTCGACATGGATTTCACGGGCTTTGAAGTGCGAAAGTGCCCACCGACT
GTCATGTACATTCCGAACTTCATCACTTCCGAGGAGGAGCAGCGCATCCT
GAGCCACATCGAGCGCACTCCGAAGCCTCGATGGACGCAGCTGCTGAACC
GCCGGCTGGTCAACTACGGCGGTGTGCCGCATCCCAACGGAATGATTGCC
GAGGAGATTCCGGAGTGGCTGCAGACCTATGTGGACAAGGTCAACAATCT
GGGGGTGTTCGAGTCGCAGAACGCTAACCATGTTTTGGTCAACGAGTATC
TGCCGGGTCAGGGAATTCTGCCGCACACAGATGGACCACTGTTCCATCCC
ATCATCTCCACCATTTCCACGGGTGCTCATACCGTGCTGGAGTTTGTCAA
GCGTGAGGACACCACAACTGAAACAGAAGCTGGAGATCAGACGACCCGTG
AAGTGCTCTTCAAGCTGCTGCTGGAACCGCGCAGCCTGCTCATCCTCAAG
GACACGCTGTACACCGACTATCTGCACGCCATCTCCGAGACTAGCGAGGA
TGTGCTCTGCGATCGCATCTCCAACTACGATCTGTGCGAGAATACCTACA
AGATCGGGGATCACTTAGTACGCCGATCGCCGCGCATCTCCCTCACCATC
CGTAATGTGCCCAAGACCAGCAAGATGAAGCTCAAGTTCTGCGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAAGTGGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTTCA
TGACTAGTGCTGGGATTCTCACCATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAACCAGATGGGAGTTCTGAGGTCATTACTGGATTCTATCA
CAGGATCCCAAGCGAGCTCGATTATCAATTACGCCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTATTCATTAAGCATTCTGCCGAACATGGAAGCATC
CAACCGGCATGATGACCTGATCGCCAGCGGCATCAGCACCTTGTCCGCCT
TGCGTATAATATTTTGCCATGGTTGAAACGGGGCCAG
UFO02883.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6144-RC | 1553 | CG6144-RC | 113..797 | 8..692 | 3425 | 100 | Plus |
| CG6144-RB | 1705 | CG6144-RB | 265..949 | 8..692 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10489050..10489705 | 37..692 | 3280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:12:26 has no hits.
UFO02883.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:35 Download gff for
UFO02883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6144-RB | 208..904 | 1..700 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:38 Download gff for
UFO02883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6144-RB | 259..955 | 1..700 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:11 Download gff for
UFO02883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6144-RB | 259..955 | 1..700 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:11 Download gff for
UFO02883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10489052..10489711 | 39..700 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:38 Download gff for
UFO02883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10489052..10489711 | 39..700 | 99 | == | Plus |
