UFO02885.5prime Sequence
1011 bp (-105 high quality bases) assembled on 2010-02-19
> UFO02885.5prime
CAGTCGACATGGAGATGGTTGAACCGGATGCCCACTTGGTGGCACTCAAA
GTTATGCGTTTGATGCGGCCCACTTTGGTGGGCCTTGGACCTGTGGTAAC
CTGCGAGCCCACGGATTTGGTCCAGAGATTTAGCAGCTCCCAGGAGAGCG
ACGGAATGTCCGGTGCCTGTGCGGAGACCTTGGCGGCCGGCCAGGTGCTA
CTGCTGCCGCAGTCCTTCGGCAGCATTTACCTGGGCGAAACATTCGCCAG
CTACATCTGCGTCCACAATACCACCCCGAATCCGGTGGAATGCGTCACCG
TCAAGGCGGATCTACAGTCGAACACGTCACGCATCAACCTATCCATGCAC
GAGAACGCCAAGTCGCCGGTGGTATTGCCGCCGGGTGGAACCATTGACGA
TGTGATACGATACGAGGTGAAGGAAATCGGAACACACATTCTCGTCTGCG
AAGTGAACTACTCGACTCCTGCGGGCTATGCTCAATCGCTGAGAAAGTTT
TTCAAGTTCCAAGTGCTGAAGCCACTCGATGTGAAAAACCAAGTTCTACA
ATGCGGAAATCGACGATATCTACTTGGAGGCACAAATCCAAAACGTGACC
ACCAGTCCCTTCTGCCTGGAAAGGTGGAGCTGGATGGCTCCGAGGACTAC
TCCGTCACACCACTGAACACGCTGCCAAATGGGGAATCCGTATTCACGGT
GAAACTATGCTGCAACCCAACAATAGTTGTCAGTTCCTCTATTGCATCAT
GCCCAAAGGAGATATTGCGAAGATGTAGATACCCTGCGGCATTTAATAAT
GTGGGTAAACTGGACATCGTCTGGAGTCAATCTGGGCCAGAAGGGAGACT
GCAATCTATTAGCTTCCGCGATTGCCATTCAATGCAAAACGCTCCGCCTG
GAGGTCTGGAATGCGAGAACAGCATTAAATCCGACGAAATTCCGTTCAAT
TGTCCGTGCGGACCCTTCGACCTCTCATTGAACTGATGTGCGTTGGCTGC
CAGTTTTCGCC
UFO02885.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4953-RA | 1746 | CG4953-RA | 106..1129 | 7..1011 | 4240 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10266911..10267300 | 50..439 | 1950 | 100 | Plus |
| 2L | 23513712 | 2L | 10267424..10267734 | 440..749 | 1395 | 98.7 | Plus |
| 2L | 23513712 | 2L | 10267798..10267875 | 751..826 | 290 | 97.4 | Plus |
| 2L | 23513712 | 2L | 10266808..10266852 | 7..51 | 210 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:49:37 has no hits.
UFO02885.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:13:57 Download gff for
UFO02885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4953-RA | 103..1082 | 1..968 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:17 Download gff for
UFO02885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4953-RA | 102..1081 | 1..968 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:04 Download gff for
UFO02885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4953-RA | 102..1081 | 1..968 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:04 Download gff for
UFO02885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10266913..10267300 | 52..439 | 100 | -> | Plus |
| 2L | 10267424..10267736 | 440..751 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:17 Download gff for
UFO02885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10266913..10267300 | 52..439 | 100 | -> | Plus |
| arm_2L | 10267424..10267736 | 440..751 | 98 | -> | Plus |
