UFO02886.5prime Sequence
979 bp (784 high quality bases) assembled on 2009-01-24
> UFO02886.5prime
CAGTCGACATGGCAAACAGCTCCAGCTCCGACGAAAGCTGCAAGGCCCCC
GACAACTTTCGCATCTCGAGCGCCTCCACAAACGGCGAGGACGAGGAATC
AGATGTCGCAGGATACACAACAAAGCGCAGGCCAACGGCAGCGACGAAGG
AACTGTTGAAGGATGCGAACGCCAAGGATAGGAACGCCACCACGGGAATG
GGTGCCCACATGCGGTGCCCACTGTGCCACAGCTGCAGCGCCAGCCGATT
CCACTGTCGCAATTGCGTCAGAAACGGAAACATTACTCACAGCCAGGCGG
AAAGGCCCGAAAGCCTGACGGAGAAGCAGCAGCGCTACATCAACCTGCAG
GCGGGCCTCAAAACCTTCAGCACGCGCTACGAACGCCTTATCGGGCAGCA
CCGCTCCAATGAAGATCGCCTGATGGCCATCAAGGCCAAGCGAAAGCAAC
TGGAGCTCCTACAGCAACTAATCTCCGGCACGGGACAGAGACTGCGCGTC
CTCGGCGAGCGACGCGATGAATTGCGTCGCGCCAATGCCGAGAAGCGGAA
GAACCTACCTAAATACCCGGACAAGGTCAAGATGCTCGAAAACTACGTGT
TGGATCGAGTGGAGAAAATAGAGAAACTCAGGGAGACCCATTCTGGGTCT
TCTGGACAGCATAAACAGGCGGCGCGTCGCAGCATTCAACAACTGGTCAC
CTATGTGTTTCCCATAGCTGAAGTGGTCCTCAAGGAGGAGCAACAGAGGC
GGGCTAGTGTGAACCGCACCGAGGATGCGGAACCATAGCGGCGCTGGCCG
ATGCCAGAATACTTCTTACATACGCGGCAATGGGTTTTCTGCAGGTGGGA
TCAGTGAAGTTCAATAAGGGATTGGTGGGCCCTTCGTTGCCAGCCATGCA
CTAAACCGGCCTACCTGACTGCCTGCGGATACAGGACGACGTTCCCAGGC
CACGCCACGAAATTACCCGAGCAGGTCCA
UFO02886.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg14-RA | 1866 | CG11877-RA | 78..1059 | 9..976 | 4200 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29116843..29117431 | 312..896 | 2410 | 96.6 | Plus |
| 3R | 32079331 | 3R | 29116468..29116772 | 9..313 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:14:28 has no hits.
UFO02886.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:35 Download gff for
UFO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11877-RA | 76..1064 | 1..978 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:35 Download gff for
UFO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg14-RA | 73..1061 | 1..978 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:30 Download gff for
UFO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg14-RA | 73..1061 | 1..978 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:30 Download gff for
UFO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29116463..29116772 | 1..313 | 98 | -> | Plus |
| 3R | 29116845..29117523 | 314..978 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:35 Download gff for
UFO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24942185..24942494 | 1..313 | 98 | -> | Plus |
| arm_3R | 24942567..24943245 | 314..978 | 94 | | Plus |
