UFO02889.5prime Sequence
995 bp (985 high quality bases) assembled on 2009-02-18
> UFO02889.5prime
CAGTCGACATGAAGGTCTTCATCTGCCTGTTGGCCACCATCTGCGCCTGC
AATGCCACCTTCCTGTCCCTTCTGGGCGGCGGCGGCGGTGGTGGAGGAGG
AGGAGGTAGCAAGACCACTTACAATGTGATAGCCACGCCCAGTTCGGGAG
GCGGCGGTGGTGGTGGTGGTGGCGGCGGCGGCGGCGGAGGTCACGGATAT
TCATATGCCCAGGGAGGCGGCGGAGGTCATGGGTATGCGCAGGGACATGG
CTACGGACATGGACACGGTGGCTCACCGCAGATCATCAAGGTCATTCTGC
AGGAGGGTCAGGGCTACAGCAACGCTGGAGGATCAGCCGGCGGCATTGTG
TCCTCGGAAGGTCATGGCTACAGTCACGGTCATGGTCATGGCTACGCCAG
TGGTCACGGATCCTATGGCGGTCAGCAGGCCCAGATATACAAGATCATCG
AACAGGCCCCGGCTCCAGTCCCAGCTCCTGCCCCCGTTCCCATTCCGATT
TCGATTCCTGCCCCTGCTCCGCCAGCTGCTCCCATTGCCTATCATGCTGC
CAGTGGCTCCAATGGCTACTCCTATGATCAGGGCCATTCGCACTCCTACG
GCCAGTCGTATGCTTCGGGACATGGTTACGGTGGTGGCGCCTCCTTCGAT
ACCCAGCAGTTCAATGCCATTCTGCCGCAGATCATCCAGTTGGTGCTGCA
GGAGGATTCCTTTGGCGGCGGCGGTGGTGGATCCGCTGATGTGGCTGCCA
TCAATGGCCAGCTGATCAACACCTTCGGCTCCAAGGGCAAGGCTATCATT
TTGAAAGCCGATCAGCGCAGGGAGCCTTCTTCAAAAGCGGACACGTGGTG
CAGCGGGGAACCCTGAAGTGATGCGCGTCCAGGAGCAGCACAATCCCAGA
GCGCTGGTGGCTCCAAGGAGCTGGGCTCTGTGGCGGTGCCATTTCCGGTG
CTGAGCTCGGCGAGTGCGCTTCCGGTGGCTGGAGCTTCCCGCCGA
UFO02889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ipod-RC | 1871 | CG2961-RC | 643..1633 | 9..986 | 4615 | 98.6 | Plus |
| Ipod-RB | 1593 | CG2961-RB | 365..1355 | 9..986 | 4615 | 98.6 | Plus |
| Ipod-RA | 1328 | CG2961-RA | 100..1090 | 9..986 | 4615 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10231318..10232226 | 918..13 | 4380 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:46:50 has no hits.
UFO02889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:34 Download gff for
UFO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipod-RA | 90..1093 | 1..994 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:28 Download gff for
UFO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipod-RA | 93..1096 | 1..994 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:49 Download gff for
UFO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipod-RA | 93..1096 | 1..994 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:49 Download gff for
UFO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10231233..10232230 | 8..994 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:28 Download gff for
UFO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10125266..10126263 | 8..994 | 98 | | Minus |
