UFO02892.5prime Sequence
1093 bp (987 high quality bases) assembled on 2009-02-18
> UFO02892.5prime
CAGTCGACATGTCCACTACCGAGGCGCCGGATGCGCTGGTGGAGCAGGTC
CGCGAGGTGACCGCTTGCTCCATGGACGAGGCCAAATATTACTTGTCTGC
CTGTGCCAACGATGTGTCCGCCGCAGTGGCTCTGTTTTTCGAACAGGCAG
CCTCCACATCCACGCCATCGGGCTCCAGTGCCGGTGCTGCGGCTGAATCG
CTACCCGTTTTGGACGACGAGGATGAGGTAAGGGCGCCAATTGCCCCGGT
CCGTGAGCAATTGATCCTGCCCGAGGACGACAATTTTTTTGCGTCGGGGA
GCAGTAGCCGGCTGTCGCGTGTGACGCAGCGCGTCAAGGTTCATCCCCTG
CGGGACTTTGCCCGCGAGGGCGCTCTAATGGAGGAGCAGCTGCAGGCCAC
TGGCGTCTATGCCGATCCCAATCGAATCCGTCGCGGACGGGCCGCCCAGA
TGGTGGTGGCCGGTCAGGCCATGGCACTTAACAGACGGTCCACAACGGAC
ACGGCAACCAGCACATCCCGCCTCGGAGACCTATTCCGCCCGCCAACGGA
CATACTCTACTCCGGATCACTAACCGCTGCCAGGGAGTTTGCCACCAAGC
GTCAGCGCTGGTTGCTGGTCAACGTGCAGGACGAAAACTTTCAGTCGCAG
ACTTTGAACCGCGATGTCTGGTCGGACAAGGAGCTTAAGAAACTGATACG
TCGCCAGTTCACCTTCTGGCAGGTGGACAACGACACCTCGGAAGGACGCC
GCTTTGTGGCCTTCTACCACTGCGCCACCCTGCCTTACATATGCGTGATC
GATCCCCGTACTGGTGAGGAAGTGTGGCCGCAGCGCAGAGCCGAAGCTGG
AGATATTCTTCCCGATTTGAGGCAGTTCTTGAAGGAGCACCGTGACTTTA
TTCAGGAGATGCACAAGCACCTCGAAGCGTTCGGCCACGTACATCGATGA
TGACGAGTGCCCGATCCGGAGCCTCGTGCCTCCTCGACAAGCCAGTTCGA
AGGAAATGGCCAAGAACGTGTGCCAAGGTTCTGGACTAACGAAGAAAGAC
ACGCTGATTGCCTCCACATTCCTACAGACGGTGGTGCGGAGGC
UFO02892.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8892-RD | 1952 | CG8892-RD | 314..1354 | 8..1045 | 4890 | 98.6 | Plus |
| CG8892-RE | 2075 | CG8892-RE | 413..1453 | 8..1045 | 4890 | 98.6 | Plus |
| CG8892-RB | 1775 | CG8892-RB | 137..1177 | 8..1045 | 4890 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4980147..4981175 | 1035..8 | 4655 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:06:56 has no hits.
UFO02892.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:57 Download gff for
UFO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8892-RB | 195..1244 | 1..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:09 Download gff for
UFO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8892-RB | 131..1180 | 1..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:59 Download gff for
UFO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8892-RB | 131..1180 | 1..1049 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:59 Download gff for
UFO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4980132..4981181 | 1..1049 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:09 Download gff for
UFO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4980132..4981181 | 1..1049 | 98 | | Minus |
