UFO02895.5prime Sequence
1086 bp (995 high quality bases) assembled on 2009-02-18
> UFO02895.5prime
CAGTCGACATGGAGACACCCATGGCCGATGACCTGTTGCAGTTCCGCGAC
TACAGCGGCGGTGCCCCGGCCCAAATCAATGTCAATTCCCCTACGCACGG
CGGATCGGGTGGTTCTGGTGGTGGCTCTGCTGGTTCCGGCGGCTCCGTTG
GCGGTGGTGGTGCCAACGCACAGCGTCAACGCGGCGATCCGCTGGCGGAT
CTCATCTATGACATGACCTCCTCGGCCCAGGGATTCTCCGGAGCTGCATC
CTCGGGCGGCTCCCAGCCGCAGAACTCATCGCTGGACGGATCCGCCGGCG
GTGGAGGCGGTGGTGCGAAACTATCACTGTTTACGATCGAGTACTACCAG
CAGTTCTTCAACGTGGACACCTATATGGTGCTCGAGCGAATCGCCAACTC
CATGATACCCAAACGGGCCTCTGGCAACTATCTGCGCATGAACATCGGCG
AGAATCCGGATCTATATGGACCCTTCTGGATAACCGTCACCCTGATCTTT
TCCATAGCAATAAGTGGTAATATTGCCAGCTATTTGCAGCAAGCCACTGA
TGCGTACAAATGGCACTACAACTTCCATCTGGTCTCCTATGCGGCTACGT
CCATCTTCTTGTATGCCAATATCTTGCCAGCCGTTCTGTGGGCCCTCTTC
AAGTACAGCCTGAAGCCTGTGGACTCCGCTGATGCCGTGGAAACGGACAG
CGCCAGCTACATGCCGAGCCTCTTGTCGCTGATGTGCATCTATGGATACA
GTTTGGCCATTTATATACCAGTCTCCATTCTCTGGGTGATCAATATCTCT
CTGCTGCAGTGGCTCCTGGTGATCACCGCCGCCTTGCTTTCGGGCACGGG
TTTGATTGCGGTGCTAACGCCAGCGCTGCGCAACTCGCAATTCTCGCTGT
TCCTCATCGTTGGAATCCTGAGTGCACATGTGGTGCTGGGCCGCCGGATT
TTGCTCTATTTTTTTCCCAATCCCACAGTCCCGTCGCTGGATCCAGTTGC
TCCGAAAACAGCTGCACCTGCTTGCTCGGCTGGTTCTGAAAGCCGGTGAA
CCAAGGCGGGTTGTTCACACGCAAATGCCCGGCCAA
UFO02895.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4645-RB | 1415 | CG4645-RB | 145..1180 | 9..1045 | 4980 | 98.9 | Plus |
| CG4645-RC | 1588 | CG4645-RC | 145..1180 | 9..1045 | 4980 | 98.9 | Plus |
| CG4645-RA | 1521 | CG4645-RA | 251..1286 | 9..1045 | 4980 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12910203..12910688 | 9..494 | 2430 | 100 | Plus |
| X | 23542271 | X | 12910752..12910960 | 494..702 | 1045 | 100 | Plus |
| X | 23542271 | X | 12911413..12911640 | 795..1022 | 970 | 96.9 | Plus |
| X | 23542271 | X | 12911024..12911116 | 702..794 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:50 has no hits.
UFO02895.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:37 Download gff for
UFO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4645-RA | 243..1289 | 1..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:54 Download gff for
UFO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4645-RA | 243..1289 | 1..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:33 Download gff for
UFO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4645-RA | 243..1289 | 1..1049 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:33 Download gff for
UFO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12910195..12910688 | 1..494 | 99 | -> | Plus |
| X | 12910753..12910959 | 495..701 | 100 | -> | Plus |
| X | 12911024..12911116 | 702..794 | 100 | -> | Plus |
| X | 12911413..12911665 | 795..1049 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:54 Download gff for
UFO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12804786..12804992 | 495..701 | 100 | -> | Plus |
| arm_X | 12805057..12805149 | 702..794 | 100 | -> | Plus |
| arm_X | 12805446..12805698 | 795..1049 | 95 | | Plus |
| arm_X | 12804228..12804721 | 1..494 | 99 | -> | Plus |
