UFO02905.5prime Sequence
1149 bp (1025 high quality bases) assembled on 2009-02-18
> UFO02905.5prime
CAGTCGACATGTCGAATACCTGGTGGTGGCTTTCAGTAGTGTTACTAATC
TTAGGGCTAATGCCTGGCATGAGTCAGCAGGCGGCCCTGGCCGAATCGGA
TTACTATACGGCCGGAGTGGTGGAGTTCAAACAGTCGATCTTAAGTCTAT
CGGCCTGGTCGGATTCCCTTGCTGGCTATGTGGAGATCATAAACTCTGAG
AACGCCAGTGCCACCGACATCATTGTGTTTCCCGAGAGCACACTGAACTC
CGCGGGTTCCACGACCTTTGTGCCCAATCCCGAGGATCAGATAAACCCGT
GTTTGAGTGACCCCAATGCCACCTACTATGAGGAGTTTCTGGTGACCCTG
TCGTGCGCGGCCCGCAATGCCAGTAAATACATTGTGATCAATCTGACCGA
GAAGCAAAAGTGCGAGGATATTCCCGAGGATACGAGGCCATGTGCATCTA
ACGGACTGAATGTTTTCAACACCAATGTAGTGTTCGATCGTCAGGGAGTC
GTGGTGTCCAGGTACCGAAAGGTTCATCTCTATGGTGAAGCAAAGAACAG
CACTTTTCTGCCCGAGCTGATCACCTTCGAGACAGACTTTGGGGTCACCT
TCGGTCATTTCATCTGCTTCGACATCCTGTTCTACACTCCCGCCCATCAA
CTCATCGTGGAGCAGGGTATTACGGACTTCGTGTATCCGGCCATGTGGTT
CTCCCAACTGCCCTTCCTCACGGCTGTTCAGACGCAACAAGGTTGGGCCT
ATGCCAACGATGTGAATCTCCTGGCGTCTGGAGCCAGTCGTCCCTCCATT
GGCAATAGTGGATCGGGCATCTATCACGGACGTTCCGGCACTTTGACCAG
TGTCATGCGCCAGGACTCCGGCGAGAGGCCATCTATGTGGCCCAGTGCCC
AAGTATACTCGCAGTAGATCCCTGAAGAAACGTGCGAAGAGGAGTCTACA
GGAGATCCAAACCCGTCAGTTGCCTCAAGCTCGAGTTTCTACATGAAGCG
CGATTACGTTGGAAGAACTATTGAGTTTTGAGTTGCCTCAGTTTGACGAG
GACTTGTGGTGCTTTTCAATAGAACCATTCTGCAGGCAGCCTTTTGGCTG
GTTACCTCCGACATAGCGTGTGAGATTCCTTGGGTTACGCGACAGGAAT
UFO02905.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| vanin-like-RA | 1864 | CG32754-RA | 14..1139 | 5..1135 | 5070 | 97.5 | Plus |
| CG32751-RA | 1603 | CG32751-RA | 187..893 | 171..877 | 2590 | 91.1 | Plus |
| CG32751-RB | 1758 | CG32751-RB | 187..737 | 171..721 | 2350 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6201764..6202409 | 723..78 | 3230 | 100 | Minus |
| X | 23542271 | X | 6197862..6198412 | 721..171 | 2350 | 95.1 | Minus |
| X | 23542271 | X | 6201094..6201387 | 1009..719 | 1290 | 98.3 | Minus |
| X | 23542271 | X | 6202470..6202546 | 81..5 | 370 | 98.7 | Minus |
| X | 23542271 | X | 6197474..6197610 | 877..741 | 250 | 78.8 | Minus |
| X | 23542271 | X | 6218525..6218578 | 634..581 | 195 | 90.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:57 has no hits.
UFO02905.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:29 Download gff for
UFO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vanin-like-RA | 10..1021 | 1..1009 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:39 Download gff for
UFO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vanin-like-RA | 10..1021 | 1..1009 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:55 Download gff for
UFO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vanin-like-RA | 10..1021 | 1..1009 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:55 Download gff for
UFO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6201094..6201382 | 724..1009 | 98 | <- | Minus |
| X | 6201764..6202406 | 81..723 | 100 | <- | Minus |
| X | 6202471..6202550 | 1..80 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:39 Download gff for
UFO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6095127..6095415 | 724..1009 | 98 | <- | Minus |
| arm_X | 6095797..6096439 | 81..723 | 100 | <- | Minus |
| arm_X | 6096504..6096583 | 1..80 | 96 | | Minus |
