UFO02911.5prime Sequence
1051 bp (972 high quality bases) assembled on 2009-02-18
> UFO02911.5prime
CAGTCGACATGATGCAAATAATACTGCCTCTTTTTGTGCTGACTGCCTCA
TGTCTTGGCAGTCCGGTGAGCCAAACCCGTCGATTCCCCAACGACTTTCT
CTGGGGCGTTGGATCATCTTCATACCAAATCGAAGGCGGCTGGAACGCGG
ATGACAAGGGGGAGTCGATCTGGGACTTTCTCACCCACACTCATCCCGAG
AAAATAGTCGATCGATCCAATGGCGATGTCTCGGCGGACAGCTATCATCA
GTGGAAGCGCGATGTGCAAATGGTCAAGGAGCTGCACGTGGGCACCTATC
GCTTCTCCCTGTCCTGGCCACGAATTATGCCCGGTGGCTATATGAACCAC
GTCAGTACAGCCGGCATTAAGTACTATTCCAACCTGATCGACGAACTGCT
GCGGTACAACATCACTCCGATGGTGACGATCTATCACTGGGAATTGCCGC
AGAAGTTGCAGGAGCTGGGTGGCTGGACCAATCCGGAGATAATTCCGCTT
TTCAAGGACTATGCTCGCCTGGTGCTGGAAATGTACGGAGATCGGGTGAA
GATCTGGACCACCGTCAATGAGCCGTGGCATGTGTGTGAGCACGGTTACG
GAGTGGATTATATGGCACCTTCGTACAACTATCCAGGCATTCCCGCCTAC
CTCTGTGGTCACAATCTGCTGAAGGCTCACGCCGAGGTGGTGCACATGTA
CCGGGAGCTCTTCCAGCCGCGTCAAGGTGGACGCATGGGCATCACACTGG
ATACGTCGTGCCCAGAGCCCAGGGATCCCAACTCCGCCGAGGATCGTGAG
GCCTCCGAGCGAGCCATGCAGTTCTATGTAGGCTGGTTCGGTCATCCCAT
CTTTTCCAAGCACGGTAACTATCCCAAGGTGATGATCGAGCGCATTCGGA
ACTTGAGCAAGGAGCAGGTTTCGGAGCACGATCCAGACTGCTGAGTTCAC
CACTGAGGAGATTCATCGCATACGGCGCACTCCGACTTCTTCGGCATCAA
TTCTATACAGCAACCTGGTCACCTCCAATGTCACCAATAAATACCCGCAA
G
UFO02911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9701-RA | 2005 | CG9701-RA | 213..1261 | 7..1051 | 4995 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16737222..16738008 | 249..1030 | 3640 | 99 | Plus |
| 3L | 28110227 | 3L | 16734422..16734623 | 50..251 | 1010 | 100 | Plus |
| 3L | 28110227 | 3L | 16733758..16733800 | 7..49 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:08 has no hits.
UFO02911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:31 Download gff for
UFO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9701-RA | 185..1233 | 7..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:20 Download gff for
UFO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9701-RA | 213..1261 | 7..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:14 Download gff for
UFO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9701-RA | 213..1261 | 7..1051 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:14 Download gff for
UFO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16733758..16733800 | 7..49 | 100 | -> | Plus |
| 3L | 16734422..16734623 | 50..251 | 100 | -> | Plus |
| 3L | 16737225..16738028 | 252..1051 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:20 Download gff for
UFO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16726858..16726900 | 7..49 | 100 | -> | Plus |
| arm_3L | 16727522..16727723 | 50..251 | 100 | -> | Plus |
| arm_3L | 16730325..16731128 | 252..1051 | 98 | | Plus |
