UFO02914.5prime Sequence
1120 bp (1014 high quality bases) assembled on 2009-02-18
> UFO02914.5prime
CAGTCGACATGCAGAAGGTTGCACTGCTTCTAGTCGCCTTCCTGGCTGCG
GCCGTGGCCCACCCAAATTCGCAGGAGAAGCCCGGATTGCTGCGCGTACC
GCTCCACAAATTTCAGTCGGCCCGCCGGCACTTTGCGGATGTGGGCACGG
AGCTGCAGCAATTGCGCATTAGGTACGGCGGAGGTGATGTGCCGGAACCG
CTGTCCAACTATATGGACGCGCAGTACTATGGGCCCATTGCCATTGGCTC
GCCACCGCAGAACTTCCGTGTGGTTTTCGACACCGGCTCCTCGAACTTGT
GGGTGCCGTCCAAGAAGTGCCACCTGACCAACATCGCCTGTTTGATGCAC
AACAAGTACGATGCCTCCAAGTCGAAGACCTACACCAAGAACGGCACTGA
GTTCGCCATCCAGTATGGCTCGGGCAGCTTGTCCGGATACCTGTCCACGG
ATACGGTGTCCATTGCCGGCCTGGACATCAAGGATCAGACATTCGCTGAG
GCGCTCAGTGAGCCGGGCCTGGTCTTCGTAGCTGCCAAGTTCGACGGCAT
CCTAGGCCTGGGCTACAACTCCATCTCGGTGGACAAGGTGAAGCCGCCAT
TTTACGCCATGTACGAACAGGGTTTGATCTCCGCTCCGGTGTTCTCATTC
TACCTGAATCGCGATCCCGCCTCGCCCGAGGGCGGTGAGATCATCTTTGG
CGGCTCCGATCCCAACCACTACACTGGTGAATTCACCTACTTGCCCGTTA
CCCGCAAGGCCTACTGGCAAATCAAGATGGATGCCGCCTCCATTGGCGAT
TTGCAGCTGTGCAAGGGCGGTTGCCAGGTGATCGCTGACACCGGTACCTC
ACTAATTGCTGCGCCCTTGGAAGAGGCCACCTCTATTAACCAGAGATTGG
TGGAACTCCCATCATCGTGTCAGTATGTGGTTTCTTGCGATCTCATCCCA
ATTGCCGTATCAAGTTTGTGCTGGGCGGAAGACCTTCGAGCTCGAGGGCA
AGACTATATTCTCCGTGTGACCAGATGGTTAGAACATCTGTCTGTCCGGC
TTTATGGCTGACTCCCCCCCTCAACGGACCCTGTGATCCGGTGACGTTCC
TTGCAAATAATTAACGATTG
UFO02914.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cathD-RA | 1396 | CG1548-RA | 104..1213 | 9..1098 | 5015 | 97.7 | Plus |
| CG6508-RA | 1379 | CG6508-RA | 418..513 | 407..502 | 195 | 80.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7822557..7823466 | 917..9 | 4500 | 99.9 | Minus |
| 2R | 25286936 | 2R | 7822344..7822487 | 1057..922 | 330 | 91.7 | Minus |
| 2L | 23513712 | 2L | 10819524..10819619 | 407..502 | 195 | 80.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:37 has no hits.
UFO02914.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:24 Download gff for
UFO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cathD-RA | 95..1178 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:03 Download gff for
UFO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cathD-RA | 96..1179 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:59 Download gff for
UFO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cathD-RA | 96..1179 | 1..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:59 Download gff for
UFO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7822549..7823472 | 1..923 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:03 Download gff for
UFO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3710054..3710977 | 1..923 | 99 | | Minus |
