UFO02915.5prime Sequence
1156 bp (1057 high quality bases) assembled on 2009-02-18
> UFO02915.5prime
CAGTCGACATGTTCAAGTTCGCTTTGACCCTGACGCTCTGCTTGGCGGGC
AGCCTTTCGCTGGCCCAGCACAATCCCCATTGGTGGGGCAATCGCAACAC
CATCGTCCACTTGTTCGAGTGGAAGTGGTCGGACATTGCCCAGGAGTGTG
AGAGTTTTCTCGGACCTCGAGGATTCGCCGGCGTTCAAGTGAGCCCCGTT
AATGAGAACATCTTATCGGCGGGTCGTCCGTGGTGGGAGCGATATCAACC
CATCTCGTACAAGCTGACCACTCGGTCTGGTAATGAGGAGGAATTTGGTG
ACATGGTCCGTCGTTGCAACGATGTGGGTGTTCGTATCTATGTGGATGTG
CTGTTGAACCACATGTCCGGAGATTTTGACGGTGTGGCTGTGGGCACTGC
TGGAACAGAGGCGGAACCCAGTAAGAAATCCTTCCCAGGAGTTCCATACA
CCGCACAGGACTTCCATCCCACCTGCGAGATTACCGACTGGAACGATCGC
TTCCAGGTGCAACAGTGCGAACTGGTTGGCCTCAAGGATCTTGACCAGAG
CAGCGACTGGGTGAGGAGCAAGCTAATTGAGTTCCTGGATCACCTCATCG
AACTGGGTGTTGCTGGCTTCCGGGTGGATGCCGCCAAGCATATGGCATCG
GAAGATCTAGAGTACATCTACAGCAGCCTGAGCAACCTGAACATCGATCA
CGGCTTTCCTCACAACTCCCGTCCCTTCATCTTCCAGGAGGTAATTGATC
ACGGTCACGAAACCGTCTCCCGTGATGAGTACAAGGATCTGGGTGCCGTC
ACCGAGTTCCGATTCTCCGAGGAGATTGGCAACGCCTTCCGTGGCAACAA
CGCACTGAAATGGCTGCAGAGCTGGGGAACCGATTGGGGATTCTTGCCCT
CGGGTCAGCCTTGACCTTTGTGGACACACGATAACCAGCGAGACGCGGGT
GCCGTGCTGACTACAGTCCCCCAGCAGTACAAATGGCAACCGCCTTCCAT
TTGGCCTATTCCTACGGCATCAGTCGGGTGATGAGCTCATTCGCCTTCGA
TGAACCCACGATACCCCGCCGCCGCAGATGCCCAAGGAAAGAAAAAATTT
CACCGGTTCGATGCGGATGGAAGCTGTGTGTGAATGGCTGAATGCGAGCA
TCTTTG
UFO02915.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amyrel-RA | 1549 | CG8221-RA | 2..1156 | 8..1156 | 5280 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16652044..16652698 | 662..8 | 3275 | 100 | Minus |
| 2R | 25286936 | 2R | 16651514..16651989 | 1130..661 | 1735 | 94.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:04:37 has no hits.
UFO02915.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:23 Download gff for
UFO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amyrel-RA | 2..1156 | 8..1156 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:31 Download gff for
UFO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amyrel-RA | 2..1156 | 8..1156 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:55 Download gff for
UFO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amyrel-RA | 2..1156 | 8..1156 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:55 Download gff for
UFO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16651488..16651987 | 663..1156 | 95 | <- | Minus |
| 2R | 16652044..16652702 | 1..662 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:31 Download gff for
UFO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12538993..12539492 | 663..1156 | 95 | <- | Minus |
| arm_2R | 12539549..12540207 | 1..662 | 99 | | Minus |
