UFO02917.5prime Sequence
1130 bp (1014 high quality bases) assembled on 2009-02-18
> UFO02917.5prime
CAGTCGACATGCAGCCGCCGGAGCTCGAGATTGGAATGCCGAAGAGGCAT
CGCGAGCATATACGCAAGAATCTGAATATACTGGTTGAATGGACGAACTA
CGAGCGTCTGGCCATGGAGTGCGTGCAACAGGGCATCCTAACCGTTCAGA
TGCTAAGAAATACGCAGGATCTCAATGGCAAGCCATTCAACATGGACGAG
AAGGATGTGCGTGTGGAGCAGCATCGTAGGCTCCTATTGAAGATCACCCA
GCGTGGTCCCACCGCCTATAACCTGCTGATCAATGCACTGCGCAATATCA
ATTGTCTGGATGCGGCCGTTCTATTGGAATCCGTCGATGAGTCCGATTCA
AGGCCACCCTTTATCTCGCTAAACGAACGGAGAACCAGCCGGAAGTCGGC
CGATATTGTGGACACACCCTCACCCGAAGCCTCCGAAGGACCCTGCGTTA
GCAAGCTCCGGAATGAGCCGCTGGGAGCACTCACCCCTTATGTGGGTGTC
GTTGACGGTCCCGAGGTAAAAAAATCGAAAAAGATACATGGTGGGGATAG
TGCCATATTGGGCACATATAAGATGCAATCACGTTTCAACCGAGGCGTTT
TGCTAATGGTTAACATAATGGACTATCCGGATCAAAACCGTCGACGGATC
GGAGCCGAAAAGGACAGCAAGTCGTTGATACACTTGTTTCAAGAACTGAA
TTTTACGATTTTCCCCTATGGGAACGTGAATCACGATCAGTTCTTTAAAC
TTCTGACAATGGTGACCTCCTCGTCGTATGTGCAGAATACCGAGTGTTTC
GTAATGGTACTGATGACACACGGCAACAGTGTGGAGGGAAAAGAGAAGTG
GAGTTTTGCGATGGATCTGTGGTCGATATGCAGAAGATCAAGGACCATTT
CCAGACGGCCAAATGTCCTTATTTGGTGAACAGCCGAAGGTGCTTATGTT
TCCCTTTTGCCGCGCGATGAATATGATTTGGGCCATCCAAGATCAAGCAA
TCTCATGAGCAGTGTTTACGCGCAAGAGGAACGGCTGACACCCAGACGAG
GCATACCCAGCGAGCACCAATGGTGCAGTCTTGCGACCCTCTGTCTCTGC
TATGTCTAATACGCTGCTATGTTACCACGC
UFO02917.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dronc-RA | 2015 | CG8091-RA | 410..1546 | 9..1126 | 5025 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9969841..9970381 | 453..990 | 2540 | 99.3 | Plus |
| 3L | 28110227 | 3L | 9968888..9969334 | 9..455 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:46:27 has no hits.
UFO02917.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:20 Download gff for
UFO02917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nc-RA | 441..1549 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:21 Download gff for
UFO02917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nc-RA | 405..1513 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:27 Download gff for
UFO02917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dronc-RA | 405..1513 | 1..1093 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:27 Download gff for
UFO02917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9968883..9969334 | 1..455 | 99 | -> | Plus |
| 3L | 9969844..9970500 | 456..1093 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:21 Download gff for
UFO02917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9961983..9962434 | 1..455 | 99 | -> | Plus |
| arm_3L | 9962944..9963600 | 456..1093 | 96 | | Plus |
