UFO02920.5prime Sequence
1116 bp (998 high quality bases) assembled on 2009-02-18
> UFO02920.5prime
CAGTCGACATGGACATAGGCACTATTGAGCTGAGCGTGGAGGCGCTGATA
GGATCCCTGCTGGCCCTCAGTATCCTCTTTGCCTTCTGCCGCAGCCTGCT
TTCCGAGGACTTTGTGAGCACCTTCAAAACACGTCACAGCTGGAAATCAA
TAAAAGTGTTGGAACAGGCCTGCTTCTGCAATGTGTGCGAGATCCTGCTA
ACCCCCTCCGCAGGACTCTTTTGCGACTGCTGCGGCCTGTGCACCCATGC
CACGCCCCCTTGCCAGCGGAGGGCGGACAGGGAGTACCGGTGCAAGGACA
AGTGGTTGCGCAACGAGTCCTCCGTGCGGCACTTGTGGGTGCATGGCAAT
CTGCCTATGGGAGTGCATTGTGCCGACTGCAACGAGGAGGTGGATCACCA
TGTCAGCACCGATCCAGGATTATACGGATGGCGATGTGCATGGTGTCAGC
GGTGCTATCATAACGATTGCTACACTCGCGCTGACTCCATGGAAGCCTGC
GACTTGGGCGAGTTCAAGGACATGATCTTCCCGCCATACAGCTTTGTGGC
CGCCCGAACCAGAGACTCGATGCGGCTCCACTTGGCCAGCATTACGCCGC
CAGACATTGAGAACTGGGAGCCGCTTATTGTGATCGCCAACACCAAGTCG
GGCAGCAGTACGGGTGCCAATGTGTTGTCCCTGCTCCGCGGTTACCTGCA
TCCGCTGCAGGTGATGGAACTGGGCTCGAGGGGTCCGCAGGACGCCCTGC
AGTGGGCCGCCAAAGCCAGTCCTCGCCCGTGTCGCATACTGGTGGCGGGC
GGCGATGGCACCATCGGTTGGGTGCTCAATACAATCTATACGCTGAATAT
CAAGCCCCAGCCCTCGGTGGCCATCATGCCGCTGGGCACCGGCAACGATT
TGTCGCGAGTTCTGGGCTGGGGAGCAAAGCCGCCCCTCTGTTCTCGACCC
GGTGAAGATCCTTAGAGCATACGGCGAGCACGTTCCGTGAATCTTCGACC
GCTTGGACCTGCAAATAGAGAAACTGCACTATCGACTGCTATTTCGAAGC
ATCCCACGAAAACGATTCATGGTGTACACTATTTTCAGTGGTAGGGGTGG
GAGTGCTAATTCCTAC
UFO02920.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgkepsilon-RB | 1926 | CG8657-RB | 115..1205 | 8..1100 | 5175 | 98.6 | Plus |
| Dgkepsilon-RA | 2010 | CG8657-RA | 199..1289 | 8..1100 | 5175 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12757960..12758865 | 166..1071 | 4250 | 98.9 | Plus |
| 2R | 25286936 | 2R | 12757744..12757904 | 8..168 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:07 has no hits.
UFO02920.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:19 Download gff for
UFO02920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgkepsilon-RA | 192..1293 | 1..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:20 Download gff for
UFO02920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgkepsilon-RA | 192..1293 | 1..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:24 Download gff for
UFO02920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgkepsilon-RA | 192..1293 | 1..1106 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:24 Download gff for
UFO02920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12757737..12757903 | 1..167 | 98 | -> | Plus |
| 2R | 12757962..12758896 | 168..1106 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:20 Download gff for
UFO02920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8645242..8645408 | 1..167 | 98 | -> | Plus |
| arm_2R | 8645467..8646401 | 168..1106 | 98 | | Plus |
