UFO02922.5prime Sequence
1122 bp (1047 high quality bases) assembled on 2009-02-18
> UFO02922.5prime
CAGTCGACATGGCTTGCTATTACCGCCAGCATGCGGACACCACGGTGACG
GTTCCAAAGTTTAGCAACGAGAGTTCCAGCGGCGGAGTGACCTACTACGA
TATCAAGGTGCGAGTGGGCAAGGTGGAATGGCTGGTGGAGCGCCGTTATC
GGGACTTTGCAAATCTTCACGAGAAGCTGGTTGGCGAGATCTCCATCAGT
AAGAAGTTGCTGCCGCCGAAGAAGCTGGTTGGAAACAAGCAGCCCTCCTT
TTTGGAGCAACGTCGTGAACAGTTGGAAATTTATCTTCAGGAGCTTCTCA
TCTACTTCCGGACAGAACTGCCGCGAGCTCTGGCCGAGTTTCTGGACTTT
AACAAGTACGACATTATTTATCTGCTACAAGATCTTGCCAAGCTGTTCAA
TGAAAGCGGTGATGCTCTGCTCAGCTCCAAGAAGGAATACAACCTTTCAG
CCCTAGAGGTCTACGCTATCAGTGAGCGGCTTAGTCTTCCCTGCCCACCG
AGCCTGGATCGCGGTGGAAAGTACGACTTCTCGCACGTGCTGGACTTTTG
CACACAACTTGTCGCTTTGGTGGTCACCCCGGTCAAGGACAATGCTAGCT
ATGCCCAGGATTACAATACGGTTGATGTGCCAATCGATCGCAGCAATATT
ATTCCGAACAGACTAAGTTTTAATCTAAATGCCTTTCGCAATCTCAAGAC
GCTCAAATTTTCGGCCTTGTCTACCGAAAACATTGTGGACATCGAACTTC
TGAAGCCGACTCTCCAGACAATCTGTGTTCATAACACAACCATACAGAAC
ATAAATCAAGTCCTGCTCTGCGACAATCTGCACAAGCACTGCGATGTGCC
AAGCCTGCTGCCAGAGACTATCCTTGCATCCCCCTCCGGATCCGGTCCCT
CCACTTCTAATGTAGTGCCTTGGTCAGTGCGGATGCGTGGCAAGAGATAA
CAGACTCGACCTGACAGCATTTGCTAACCCAAATCGATGGCAGTGTACGA
ACAGCTCCAAAACTCAGAACGCTATCTGACAGATCGAATACGGACGTCCA
AAATCTGGCCGAACTTCCTCACTTCAGTTGCTTTCGCTTTTCTGGAAATC
TTATAAACAAAAATGGGTTGTG
UFO02922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11807-RC | 1993 | CG11807-RC | 217..1323 | 9..1105 | 5085 | 98 | Plus |
| CG11807-RB | 2106 | CG11807-RB | 271..1377 | 9..1105 | 5085 | 98 | Plus |
| CG11807-RA | 1945 | CG11807-RA | 110..1216 | 9..1105 | 5085 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15203020..15203678 | 457..1105 | 2630 | 96.1 | Plus |
| 2R | 25286936 | 2R | 15201892..15202129 | 223..460 | 1160 | 99.2 | Plus |
| 2R | 25286936 | 2R | 15201616..15201831 | 9..224 | 1080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:11 has no hits.
UFO02922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:25 Download gff for
UFO02922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11807-RA | 88..1189 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:22 Download gff for
UFO02922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11807-RA | 105..1206 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:26 Download gff for
UFO02922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11807-RA | 105..1206 | 1..1095 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:26 Download gff for
UFO02922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15201611..15201831 | 1..224 | 98 | -> | Plus |
| 2R | 15201894..15202127 | 225..458 | 99 | -> | Plus |
| 2R | 15203022..15203678 | 459..1104 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:22 Download gff for
UFO02922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11089116..11089336 | 1..224 | 98 | -> | Plus |
| arm_2R | 11089399..11089632 | 225..458 | 99 | -> | Plus |
| arm_2R | 11090527..11091183 | 459..1104 | 96 | -> | Plus |
