UFO02928.5prime Sequence
1122 bp (1029 high quality bases) assembled on 2009-02-18
> UFO02928.5prime
CAGTCGACATGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGG
AGGCTGCCGCCCCAGCAGATCGAGAAGAACCTTATTGATCTGATAGACTT
GGCACCGGATCTCTGCGAGGACTTGCTCTCCTCCGTGGACCAGCCGCTGA
AGATCGCCAAGGACAAGGAGCACGGCAAGGACTATCTGCTGTGCGACTAT
AACCGGGATGGGGACTCCTACAGATCGCCCTGGTCGAACTCCTACTATCC
GCCGCTGGAGGATGGCCAAATGCCCTCGGAACGACTGCGCAAACTGGAAA
TCGAGGCGAACTATGCCTTCGATCAGTACAGGGAGATGTACTACGAGGGA
GGCGTCTCCTCCGTCTACCTATGGGATCTGGATCACGGGTTTGCCGCCGT
TATACTGATCAAAAAGGCGGGAGATGGCAGCAAGATGATCCGCGGCTGCT
GGGACTCCATCCATGTGGTCGAGGTACAGGAGAAGACCACCGGCAGGACG
GCCCACTACAAGCTCACCTCCACGGCAATGCTCTGGCTGCAGACCAACAA
ACAGGGTTCGGGAACCATGAATCTGGGCGGATCCCTCACCCGGCAGCAGG
AGCAGGACGCCAACGTCAGCGAGTCGTCGCCGCACATCGCCAACATTGGC
AAGATGGTCGAGGAGATGGAGAACAAGATCAGGAACACCCTGAACGAGAT
CTACTTTGGCAAGACCAAGGACATCGTGAACGGACTAAGGAGCACACAAT
CACTGGCCGATCAGCGCCAGCAGGCGGCCATGAAGCAGGACCTCGCAGCG
GCCATCCTGCGACGCAATGTCAAGCCCGAATCGAACGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGATTCTCACCATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
TCCAGATGGAGTTCTGAGGTCATTTACTGGATCTTTCACAGAGTCCAGCG
AGCTCGATATCAAATACGCCCCCGCCTTGCCCTCATCGCGGTACTGTTTG
TTAATTCTTTAAGACATTCTGC
UFO02928.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cpb-RB | 1713 | CG17158-RB | 148..975 | 9..836 | 4125 | 99.9 | Plus |
| cpb-RA | 1591 | CG17158-RA | 211..1038 | 9..836 | 4125 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1705399..1706224 | 11..836 | 4115 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:12:15 has no hits.
UFO02928.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:13 Download gff for
UFO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpb-RA | 209..1036 | 9..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:31 Download gff for
UFO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpb-RA | 211..1038 | 9..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:28 Download gff for
UFO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpb-RA | 211..1038 | 9..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:28 Download gff for
UFO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1705392..1706224 | 1..836 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:31 Download gff for
UFO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1705392..1706224 | 1..836 | 99 | == | Plus |
