UFO02946.5prime Sequence
1154 bp (1038 high quality bases) assembled on 2009-02-18
> UFO02946.5prime
CAGTCGACATGACGAGCTTGGATTTCAGACTGGCAGTAGCTCTCTGGCTA
ATCTGTACGTCGGCTGCCCAGAACTCCACGGATGTCGAACAGGATGGCCG
CATTGTCGGCGGCTGGGAGACGCACATCACCTTCTTTCCGCACCAAGTAT
CCCTGCAGTTGGGCACCCGGCATGCATGCGGTGGAACCATCATTTCGCCC
AACATCATCTTGACTGCTGCTCACTGTGTGCTGGAGTACAGTAAACCGCA
ATATTACGTGATTCGAGCCGGATCTAGCGATTGGACGAAGGGCGGCAGCT
ATATTCGCGTCAAAAAGATCATTCCGCATCCTGAGTTCCATGACCCCACG
AGGATGAACAATGACATTGCCATTGTTCAGCTGCAGCAACCCCTTGTCTA
TAGTCAGGATATACGACCCATAAGCTTGGCCACCAGTAAGGACATCATTA
TGCCGACCGCACAGCTTTTTGTAAGCGGCTGGGGCAGCACGTCGATCTCA
CAAATGCAGCCGGAAAAGCGTCTTCGCTACACCGTTGTCCATCTGAGAGA
TCAGAACCAGTGTGCCAGAAACTATTTCGGAGCTGGCACCGTGACCAACA
CCATGTTCTGCGCGGGAACTCAGGCGGGAGGAAGAGATAGCTGCCAGGGA
GATTCGGGCGGTCCACTTGTCACATCTATAGATGGCCGTCTAAAGCTCTA
CGGCATTGTGTCCTGGGGATTTGGATGCGCAAACGCCATGTTTCCTGGAA
TTTACACAAAAGTTTCGGCCTATGACGACTGGATAGCGCAGACAATTGAG
GAGCTGGTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCACGAGCGTTCTGAACAAATTCAGATGGAGTTCTGAGTCATTAC
TGGATTTTATCAACAGAGTCCAGGCGAGCTTCGATATTCAAATTTACCGC
CCCGGCCCTGCCACTCATCGCAGTACTGTTGTATTTCATTAAAGCATTCT
GCCGACTTGGAAGGCCATCACAAACGGCCAGGTGAGATGAACCTGGAATT
GCGC
UFO02946.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18065-RA | 1631 | CG18065-RA | 658..1458 | 9..809 | 4005 | 100 | Plus |
| CG13430-RB | 1009 | CG13430-RB | 36..836 | 9..809 | 4005 | 100 | Plus |
| CG13430-RA | 1631 | CG13430-RA | 658..1458 | 9..809 | 4005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20550507..20551307 | 809..9 | 4005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:19:43 has no hits.
UFO02946.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:29 Download gff for
UFO02946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18065-RA | 647..1458 | 2..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:59 Download gff for
UFO02946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18065-RA | 651..1462 | 2..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:19 Download gff for
UFO02946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13430-RA | 651..1462 | 2..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:19 Download gff for
UFO02946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20550503..20551312 | 2..815 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:59 Download gff for
UFO02946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16438008..16438817 | 2..815 | 99 | | Minus |
