UFO02957.5prime Sequence
1139 bp (1007 high quality bases) assembled on 2009-02-18
> UFO02957.5prime
CAGTCGACATGAATGAGTCCGAGATCCCCATCGACATACACACGCTGAAG
CTGCAGGACTGGCTGATCAGCCGCAGAATTGTGCCCAAGAATGTGCAGCA
GGAGCTTAGGGAGATCCACAGGAAGATTAGCAACGCCCTGCAGGACATGC
CCTCCAATGAGCAGCTGATCAAGCTGTTGGCCCGGACAAATATCAACTAC
TACCATGTGAAGGAGATCATTGAGATCCTCAAGCAGACGGAGAAGGACAC
CAAGAGCGTGTTCGGCACCTACGGCAGCCAGCGCATGAAGGACTGGCAAG
AGATTAGCCGCCTGTACGAAAAGAATGCCACCTACCTGGCCGAAACGGCT
CAGATTTTCGTGCGCAATGTGAACTACGAGATTCCCGGAGTGCGAAAGCA
GATGGCCAGGCTGGAGCAGCAGGCGGACGAGACCCAGAAGCGAGCGCACG
ATCTGAACAAGCCCGAGAGCCAAATCCTGGCCGACCACTCGGCTTTGCTG
GAGCAACTGGGCGTCAAGGGCGACAATCTGCATGCCGAGTTCGTCCAGGT
TCTATCTGGTCTACCGGAACTATACGATAAGTCGCTGGTGGGCATTGCCA
ATATTCAGCCGGGCATCGACCTGTATGCGGAGGTCAGCGGCAACAAGCAA
GTGCTGCCTATCCTGAACCACCTGGTGGAGTTTGGCAACACCACCGTGTA
CCAGTACATCCACAAGGAAGCACCCTTGGCCGTCGAGGAGCCGCCCATTC
GGCTAAATCTCAGCGAGGGCAACGCCAGCAAGGATGACAATGCTGTGGCC
GAGATTGACTTCGGAACGGATGACAACGGCGGAACTTCGTCGACCGTTTC
GGCTGAGATTATCGACTACGGGACTTCGGCAGCGGGGATTTGCCGGAAGC
GACGGCGGCAACATCGACTGGGGCATTGAGAGTGCCCCCCACCGATGCGT
GAAATCATTTTGACATTCCCGTCGAGGAGTACGGCATCGTGTGGAGGGCC
ACCGGCATGATGGCGCACTGCCAAGGCGATCAGCCTACACTTTGCTGGAC
CTCACCCACTATCGCGATCGCTTCCTGAAGAAATCCTCCGACCTGATCCT
TTCCACGCAAGGCTATCCTCACGAGCTCAGCGCCTGATC
UFO02957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30291-RA | 1655 | CG30291-RA | 79..1207 | 9..1129 | 5065 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21008381..21009204 | 1009..190 | 3755 | 98.4 | Minus |
| 2R | 25286936 | 2R | 21009256..21009430 | 189..15 | 875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:10:00 has no hits.
UFO02957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:54 Download gff for
UFO02957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30291-RA | 76..1170 | 9..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:25 Download gff for
UFO02957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30291-RA | 79..1173 | 9..1095 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:53 Download gff for
UFO02957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30291-RA | 79..1173 | 9..1095 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:53 Download gff for
UFO02957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21008362..21009204 | 190..1026 | 98 | <- | Minus |
| 2R | 21009256..21009430 | 15..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:25 Download gff for
UFO02957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16895867..16896709 | 190..1026 | 98 | <- | Minus |
| arm_2R | 16896761..16896935 | 15..189 | 100 | | Minus |
