UFO02989.5prime Sequence
1127 bp (1016 high quality bases) assembled on 2009-02-18
> UFO02989.5prime
CAGTCGACATGGCGCAAACGCAAGCTCCAGCCGCCAAGCGCATGAAGCTG
GAGAAGACGCCGGCAAATCCCGTCGAAGAGGATGAGACGCCCTCCGTGTT
CAATCCGAAGTACAGGGTGTGTCCCTACTTGGACACCATCAACCGTAACC
TGCTGGATTTCGATTTCGAGAAGCTTTGCTCCATTTCGCTGACGAGGATC
AATGTTTATGCCTGCCTGGTGTGCGGCAAGTACTTCCAGGGACGTGGCAC
CAACACCCACGCCTACACACATTCCGTGGGCGAGGCTCATCACGTGTTCC
TCAATCTGCACACGCTGCGATTCTACTGCCTGCCGGATAATTACGAGATC
ATCGACTCCTCGTTGGACGATATCAAATACGTGCTAAATCCAACGTTCAC
ACGCCAGGAGATCAGCAAGTTGGATCAGTTACAGCCGAAGCATTCGCGAA
CCGTGGACGGTGTTCTGTACTTACCCGGCGTCGTGGGTTTGAACAACATC
AAAGCGAACGACTACTGCAATGTGGTGCTGCATGCACTCTCCCACGTCGG
TCCACTTAGGGACTACTTCCTGCAAAAGCAAAGCTATGCGCATGTCGTGC
GGCCACCTGGAGATTCCGTGTTCACGCTGGTGCAACGTTTCGGCGAGCTA
ATGCGCAAGATGTGGAATCCGCGGAACTTTAAGTCGCACGTTTCGCCACA
CGAGATGCTGCAAGCTGTGGTGCTTTGGTCCAGCAAGCGTTTCCAGATCA
CCGAGCAAGGCGATCCCATTGACTTTCTGTCCTGGTTCCTCAATACACTG
CACCGCGCCCTCAAGGGCAACAAACATCCGAATTCTTCTATACTCTACAA
GATATTTCTGGGCGAGATGAAGATCTACACGCGCAAGATGCCGCCCGTCG
AGTTGGACGACGCTGCCAAGGCGCACTGCTGGCACCGAGGAGTACAGGAC
AGTGAGGACAAAATTTCATCTACTCACATGCGATCTACCTCCGCCGCCGC
TGTCACCGACGAGTTTCGCGAGACTCATACCGCAGGTGACTTATATTCAG
CTGGCTGACCAGTCAATGGCACTGCGAAAAGGAGTACAAGACCTACAGCT
ACCTTAAGAGGCCTTCGAATTACCGGC
UFO02989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7288-RA | 1695 | CG7288-RA | 93..1194 | 9..1097 | 5080 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18858488..18859514 | 84..1097 | 4355 | 97 | Plus |
| X | 23542271 | X | 18858377..18858432 | 29..84 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:04:44 has no hits.
UFO02989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:47 Download gff for
UFO02989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7288-RA | 80..1191 | 9..1105 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:35 Download gff for
UFO02989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7288-RA | 93..1204 | 9..1105 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:00 Download gff for
UFO02989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7288-RA | 93..1204 | 9..1105 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:00 Download gff for
UFO02989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18858295..18858316 | 9..30 | 100 | -> | Plus |
| X | 18858379..18858432 | 31..84 | 100 | -> | Plus |
| X | 18858489..18859532 | 85..1110 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:35 Download gff for
UFO02989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18752328..18752349 | 9..30 | 100 | -> | Plus |
| arm_X | 18752412..18752465 | 31..84 | 100 | -> | Plus |
| arm_X | 18752522..18753565 | 85..1110 | 97 | -> | Plus |
