UFO03024.5prime Sequence
1044 bp (978 high quality bases) assembled on 2009-01-24
> UFO03024.5prime
CAGTCGACATGAGCCACAAGGGCAGCACGCACATAGCCCACAGACGGGAT
ATCGGAGACACCACGAAAGCACATGTGCAGGATGGAGAAGTACTTAGCTC
GGAAACCAATGAACACGATGGATTTCCACAGGAAGCTTATATTAAAACCG
AGCCCTTATGCGAAGATCTGTCGGAAGTCCTGGACGAGCTGGGGGAAATA
CTGGACGAGGAGCTGGCCGATATGTTGGATATGAGGCAGAGCAACATTAT
ATATAGGGACCAGGGCGAGATTATGGATAAGGAGGAGGCCGAGGTGGATG
AGGAAGAAGCGGGCACGCCACCGGCGCCCTCCATCTCACTTACCGACGAC
GCCTCTTTATTCACCAGGAGATCAAGACCATATGCTGACGATTCTCCCCT
AAGCTTTAGTGGATCTTTATACGAGCCGGGAGGCTCAAGTGGGGAAGACC
AGAAAGAACCAGTTCGTGGCAATAATTTACATGAAATTGCCTTAGTGCGG
TTCCGAAACTGTCCAGAACAGAGCTTAAAACGCTGCAGTATCGACGCTTT
CGTCGAACGAAAGTTCCCCTCGGAGAATAAGATAAATCGAAGAAGCACCC
GCAGCACATCCAATGAAAAGAGTGCCACACAAAGACGATCGGTTAGTCGC
AGTCACATCCCAAGGTGCAGAGGCAGAAGAAGGAGCCAGTCCAGGAGCCC
AAACAGAACCAAAGCAAAGATCGAGTCCGCCCACCCACAAAAGGCGATCA
AGTCCATCTAGAGAACACATTAGGTCTCGGAAGCGATGCTACTCTAGGGA
CCGAAGAGAGCGGCGTAGCAGACTACCATCTAGGCGCAACTTATCTCGAG
GTCCCGGAGCCCAGATCACAGAAGTCGTTCGCGATATCGTTCTCTAAGCA
AAGGGTCAAGACATGCGTCGCCTGTGCTGGGAACCGTCACAGATCCCTCA
GATCTCAGCGTTGGACGGAGGCTTGGGTCCCGGAATTCGCCAAGTACCGC
CGTTCTCGGTATCCGGTCAAGAGCCACTCTCTAGGCTATTCAAC
UFO03024.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32452-RC | 2130 | CG32452-RC | 164..1187 | 8..1030 | 4835 | 98.5 | Plus |
| CG32452-RB | 1932 | CG32452-RB | 164..1187 | 8..1030 | 4835 | 98.5 | Plus |
| CG32452-RA | 2018 | CG32452-RA | 250..1273 | 8..1030 | 4835 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22717977..22718983 | 8..1013 | 4660 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:20:45 has no hits.
UFO03024.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:03:41 Download gff for
UFO03024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32452-RB | 147..1181 | 1..1037 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:14 Download gff for
UFO03024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32452-RA | 245..1278 | 1..1037 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:11 Download gff for
UFO03024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32452-RA | 245..1278 | 1..1037 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:11 Download gff for
UFO03024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22717972..22719005 | 1..1037 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:14 Download gff for
UFO03024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22711072..22712105 | 1..1037 | 97 | | Plus |
