UFO03037.5prime Sequence
1124 bp (1015 high quality bases) assembled on 2009-02-18
> UFO03037.5prime
CAGTCGACATGAGCTCCATGGACTGCGCCACGTTCCCAATGCATCCTAAA
ATGGACGAGCAACTGGCCCGAACCTTCGTCATCAACGAGGAGGAGGAGGA
GAAGCACATTCAGAAGGTGCAGAACGCCTTCCTTTACTATGGGCCATATG
CGTGTCAGCGGCTAAAGCGCTCCATGGATTACCTGAACAGCCTGTCTGGC
GAGGACCAAATCATGCTAGCCAAGTACCGAGGGCATCTGGAGTGCGTGCG
CACGTGCATCGATCGCAACCAGGCGGTTATCCGGGAAATATTGCGCGGGC
GTGTCCTCTATCCGACGGATGAGGCGACTGGTGATCCCTCGGAGTTTGAC
GAGCCGCCGCCAAATGTGCGGCACGGTGACATGGACCAGGCCCAGTCGAC
GTTGAAGTTGATTGCGCGCGACTGGAGCACTGAAGGAGCCTTAGAACGGG
AGCAATCGTATAAACCGATCATCGACAGCATCGTTGCGTACTTCAAGCAC
AGCGATTTCGAGCTGAAGGATATAAAGATCCTAGTGCCGGGAGCGGGGTT
GGGACGGCTCACCTACGAGCTTGCCTGCTTGGGGTACTCGTGCGAGGGCA
ACGAGTTTTCCTACTTCATGCTGATCGCCTCCAATTTTGTCCTCAACCTC
TGCGACAACGAGAACAAGTACGTGTTATATCCGTGGGTGCACCAGTATGT
GAATAACTTAAGGCGTGAGGATCAGGTGGCCCCCGTTCGTTTCCCAGACG
TCTGCCCGCTTAAAAATCCACCCAAGGGCCATTTTGAAATAGCAGCTGGC
GACTTTCTGGAGGTCTACAAGACGCCGAACGCCTACAACTGCGTGGCTAC
GTGCTTCTTCATCGATTGTGCCATAATGTTATTGACTTCATACGCACAAT
TTACAAAATCCTCGTGCCTGGGGGCATTTGGGTGAATCTCCGGGCCGCTG
CTGTACCATTTTAGCGACGTCAGCGGGCAAACAGCATCGAGCCGGCTTTC
GAGGACTTTTCATATATCTTGGAAGCGTAGATTCGTTATCCGAAATCGCC
ACGGGCATCCGTATACAAGTACGCACAGAACCGGCTCTCCAATGAACAGA
CCGAGTACAGAAGTCTTTTCTCTG
UFO03037.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11596-RA | 1747 | CG11596-RA | 104..1220 | 9..1121 | 5110 | 97.9 | Plus |
CG11596-RE | 1765 | CG11596-RE | 508..1245 | 388..1121 | 3215 | 96.8 | Plus |
CG11596-RD | 1544 | CG11596-RD | 287..1024 | 388..1121 | 3215 | 96.8 | Plus |
CG11596-RE | 1765 | CG11596-RE | 104..458 | 9..389 | 1495 | 93.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1928333..1928581 | 142..390 | 1245 | 100 | Plus |
X | 23542271 | X | 1929454..1929711 | 650..906 | 1240 | 99.6 | Plus |
X | 23542271 | X | 1929244..1929384 | 509..649 | 705 | 100 | Plus |
X | 23542271 | X | 1927786..1927920 | 9..143 | 675 | 100 | Plus |
X | 23542271 | X | 1929050..1929170 | 388..508 | 605 | 100 | Plus |
X | 23542271 | X | 1929773..1929990 | 907..1121 | 405 | 86.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:52 has no hits.
UFO03037.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:14 Download gff for
UFO03037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11596-RA | 81..1086 | 1..1006 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:20 Download gff for
UFO03037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11596-RA | 97..1102 | 1..1006 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:41 Download gff for
UFO03037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11596-RA | 97..1102 | 1..1006 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:41 Download gff for
UFO03037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1929773..1929872 | 907..1006 | 97 | == | Plus |
X | 1927779..1927919 | 1..142 | 97 | -> | Plus |
X | 1928334..1928580 | 143..389 | 100 | -> | Plus |
X | 1929052..1929170 | 390..508 | 100 | -> | Plus |
X | 1929244..1929384 | 509..649 | 100 | -> | Plus |
X | 1929454..1929711 | 650..906 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:20 Download gff for
UFO03037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1821812..1821952 | 1..142 | 97 | -> | Plus |
arm_X | 1822367..1822613 | 143..389 | 100 | -> | Plus |
arm_X | 1823085..1823203 | 390..508 | 100 | -> | Plus |
arm_X | 1823277..1823417 | 509..649 | 100 | -> | Plus |
arm_X | 1823487..1823744 | 650..906 | 99 | -> | Plus |
arm_X | 1823806..1823905 | 907..1006 | 97 | == | Plus |