UFO03038.5prime Sequence
1113 bp (1002 high quality bases) assembled on 2009-02-18
> UFO03038.5prime
CAGTCGACATGAGCAACATCAGCAACGACAGTGGATTGGATGACTCCGCG
AACAGTGGAGCCGTTGTCAGCGCCAATGGACCATTGGCAGCGACTCGGTT
ATCCTGGTTCCTGGCCGAAGTCGATGACGGCTTGATGAAGGATGGGAAGC
CAAATGGTCGACGCCGTCTCTGCGTTCTCCATTCGATGGAACTCCTAGAG
TCAGATGTTTCAGACAAATACATGACCCGATTCGTAGAATTCCGGGTCAA
TGGAATGGTGCTGGAGGCGAAACTCATACTGGCAGCGGATGAGAGGCGCC
TGGTGGATGCAGCATTGCTGTCCATGAGCAAGGAGGAGAGGGAAGATGCC
GGCGGCCAGCAACTGTTGGTCCAGTACACCGAGAATGAAAAGGCGGGCGA
GCGCCTCATCCAGAAACTTGTTTCTCCAAACAATGTAATGCTGCTGAGCA
CCAAGCCCGAGCTGAAGGGTAATCCTCTGGTGAGGTTGGCTCCCGGCTGC
ATTGCCCACATCCTATATGCCTACGAAAGTCGTGATTATATGGAAAAGAT
ACTACTGCACCTGAAAGCGCGAAGCTTTGATCTCGCCTTCGATGATAATT
TGGAAGCTGAACCGGAGGCCATGAATGATGACACTTGGATGCTGGTGCAA
TACAGTCCCGAACCGGAGATGGTGGTATACCAGGTGGTGCAGTACAGACA
AACCGTGTGGAGGAAAGAGAATCTCTTTAAGGACGTTATTGCCTACATGC
AACTTCCTGGTAGCGACATCGTCCTCCAGGCGGTGGTCATCAGCTATGGC
CAGGACAAAGAGGTCCAGGACGCGAAGTATGAGGAGTTGCAACGATTCTC
TTTTGATATTGACTTTCCACTGCCCGAAGAACTGGAGAAGCACCCCGATC
ACATGACGTCCACCGCCCTCTTCTCGCGAACCAGCTTGTATCAGAAGCGA
GCAGCGGGACACTACTGGAGAGCACAGGAGTTGCGAAAAGTTTGGAACAG
ATGACGAAAAGGCGCAAGGCCGAGGCCCAAATGATCATAGATGCCTTCGA
CATGGTGGAAAAATATTAACAGAATCTCCAAGAGTTGGTTGTCGGGAAGG
GGGGAATCGGGTA
UFO03038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-RA | 1446 | CG15634-RA | 138..1230 | 8..1097 | 5135 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4687648..4688703 | 8..1059 | 4975 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:05:15 has no hits.
UFO03038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:13 Download gff for
UFO03038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-RA | 129..1212 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:59 Download gff for
UFO03038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 131..1214 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:17 Download gff for
UFO03038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 131..1214 | 1..1080 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:17 Download gff for
UFO03038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4687641..4688724 | 1..1080 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:59 Download gff for
UFO03038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4687641..4688724 | 1..1080 | 98 | | Plus |
