UFO03052.5prime Sequence
451 bp (237 high quality bases) assembled on 2009-02-18
> UFO03052.5prime
CAGTCGACATGGCCAAGTGGGGAGAAGGAGATCCGCGCTGGATTGTGGAG
GAGCGGCCCGACGCCACCAACGTGAACAACTGGCACTGGACGGAAAAGAA
CGCCACGCCATGGTCCAAGGACCGCCTGCATCATTCCTGTCAGGATTTCA
AAATAGGGCAAAGCGACATTGAGTGTGCCGTGGACTCCGTGGACAAATGC
TCCGGGGAGGCCACCGTGAACAATCGCAAGGGCAAGCTCTTTTCCTTCTA
CGAGTGGGAGCAGGTGCTCAAGTGGTCTGGAATGCCCTGCAAGAACCGGA
ACCTGACCCGCTCGGGCACGTAAACCATTCCCAATCTCTCCGAGGAGAAC
GAACTACACGACGTATTATCTTGGTGACCATCCCCTGGTCCAATGACCAC
TCCGATACTCTGCACCACTTCATCTCCGAGCTGGGCAGAGAACCCCTGAG
C
UFO03052.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1416-RC | 1457 | CG1416-RC | 101..457 | 9..365 | 1395 | 93 | Plus |
| CG1416-RB | 1500 | CG1416-RB | 144..500 | 9..365 | 1395 | 93 | Plus |
| CG1416-RA | 1644 | CG1416-RA | 203..559 | 9..365 | 1395 | 93 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21758440..21758650 | 155..365 | 740 | 90 | Plus |
| 2L | 23513712 | 2L | 21758212..21758360 | 9..157 | 670 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:05:11 has no hits.
UFO03052.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:06:03 Download gff for
UFO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1416-RA | 206..567 | 1..365 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:56 Download gff for
UFO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1416-RA | 198..559 | 1..365 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:16 Download gff for
UFO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1416-RA | 198..559 | 1..365 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:16 Download gff for
UFO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21758207..21758359 | 1..156 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:56 Download gff for
UFO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21758207..21758359 | 1..156 | 94 | -> | Plus |
