UFO03082.5prime Sequence
417 bp (385 high quality bases) assembled on 2009-02-18
> UFO03082.5prime
CAGTCGACATGTCGCGCCATCCGAGCGATAGAAAGGTGTACGTGGGCGAT
CTGGGCAACAATGCCCGGAAGAACGACCTGGAGTATGTATTTGGAGCGTA
CGGCAGTTTGCGCAGCGTCTGGATAGCCCGCAATCCGCCGGGCTTCGCCT
TCGTGGAGTTTGAGAGTGCCCGCGATGCGGCGGATGCGGTGCGCGGATTG
GACGGACGGACGGTTTGCGGGCGCCGAGCCCGTGTGGAATTGTCCACCGG
AAAGTATGCTAGGTCCGGCGGTGGTGGTGGCGGAGGTGGTGGAGGCGGTG
GTGGTGGAGGAACCTGACTTCTGTGGTGAGGCGGCGGTGGTGGTGGGAAA
AAAAAATATTACTAGCGCTGAGGAAAGTAGCATTTTATTTGCTGTTTTCT
GTATTGGACTGCTGTTC
UFO03082.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
x16-RB | 1784 | CG10203-RB | 269..571 | 9..311 | 1515 | 100 | Plus |
x16-RA | 1707 | CG10203-RA | 269..571 | 9..311 | 1515 | 100 | Plus |
Rbp1-like-RC | 1456 | CG1987-RC | 298..354 | 108..164 | 180 | 87.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6919640..6919942 | 311..9 | 1515 | 100 | Minus |
X | 23542271 | X | 13384524..13384580 | 164..108 | 180 | 87.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:13:50 has no hits.
UFO03082.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:16:49 Download gff for
UFO03082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
xl6-RA | 328..679 | 1..355 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:02 Download gff for
UFO03082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
x16-RA | 264..615 | 1..355 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:57 Download gff for
UFO03082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
x16-RA | 264..615 | 1..355 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:57 Download gff for
UFO03082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6919596..6919947 | 1..355 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:02 Download gff for
UFO03082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6919596..6919947 | 1..355 | 94 | | Minus |