Clone UFO03095 Report

Search the DGRC for UFO03095

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:30
Well:95
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03095.5prime Sequence

697 bp (697 high quality bases) assembled on 2009-02-18

> UFO03095.5prime
CAGTCGACATGTCAGCTCAACTGGCCAGAAACTGGCCGTACATCTGGCAA
CAGCTCAATGCTCTGCTGCACAACACCTCGCCGGTCATAACGCTCATCTG
CGTGGTGACCACGTTCGGCTACCTGCTATCCTTCTCGGAGACGGCCATCC
TGCTGCTCAGCGTCACTCCCGGTTACATCCTGCCCAATGGCAAGTTCTGG
ATATGGACCGCCTTCACGTTCTGCTTCATCGAGCTGCACTGGTGGGAGGT
GGCCGTCGACGTGGTCACCGTCGGCCTGTGCGGCAAGATGCTGGAACCGC
TCTGGGGCCAGCTGGAGATGTTCAAGTTCTTCCCGCTGAGCAACTTTGGC
GTCTCGCTGCTGACCACTGTCTACTATTTGTTCTACTACATGGTCACCAA
GAACCCGACCATTCTCTTCGAGGTGCACATTCACGGCCTGGCCGGATACG
TGGCTGGCATCTGCGTAGCCGTACGCCAGATAATGCCCGATCACCTGATC
TTCAAGACGCGCTACGGACGTCTGACCAATAGGAACGTTCCCCTCACGGT
GCTCATCATGGCCATCATACTGTGGGCCATTGGCCTGCTAAATGGCACTT
ATCCGGCTATGTTCGCCTCCGGATCGCTGGTTTCTTGGATCTATCTCCGC
TTATATCAACACCATCCCCAATGGGCGTGGCGACAGCTACGGAAAGC

UFO03095.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9536-RB 1888 CG9536-RB 230..917 8..697 3340 99.1 Plus
CG9536-RA 1944 CG9536-RA 230..917 8..697 3340 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6476221..6476746 533..8 2615 99.8 Minus
2L 23513712 2L 6475648..6475804 688..531 710 98.1 Minus
Blast to na_te.dros performed on 2014-11-28 23:15:10 has no hits.

UFO03095.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:53 Download gff for UFO03095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9536-RA 221..914 1..697 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:02 Download gff for UFO03095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9536-RA 224..917 1..697 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:55 Download gff for UFO03095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9536-RA 224..917 1..697 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:55 Download gff for UFO03095.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6475640..6475802 533..697 96 <- Minus
2L 6476222..6476752 1..532 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:02 Download gff for UFO03095.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6475640..6475802 533..697 96 <- Minus
arm_2L 6476222..6476752 1..532 99   Minus