UFO03095.5prime Sequence
697 bp (697 high quality bases) assembled on 2009-02-18
> UFO03095.5prime
CAGTCGACATGTCAGCTCAACTGGCCAGAAACTGGCCGTACATCTGGCAA
CAGCTCAATGCTCTGCTGCACAACACCTCGCCGGTCATAACGCTCATCTG
CGTGGTGACCACGTTCGGCTACCTGCTATCCTTCTCGGAGACGGCCATCC
TGCTGCTCAGCGTCACTCCCGGTTACATCCTGCCCAATGGCAAGTTCTGG
ATATGGACCGCCTTCACGTTCTGCTTCATCGAGCTGCACTGGTGGGAGGT
GGCCGTCGACGTGGTCACCGTCGGCCTGTGCGGCAAGATGCTGGAACCGC
TCTGGGGCCAGCTGGAGATGTTCAAGTTCTTCCCGCTGAGCAACTTTGGC
GTCTCGCTGCTGACCACTGTCTACTATTTGTTCTACTACATGGTCACCAA
GAACCCGACCATTCTCTTCGAGGTGCACATTCACGGCCTGGCCGGATACG
TGGCTGGCATCTGCGTAGCCGTACGCCAGATAATGCCCGATCACCTGATC
TTCAAGACGCGCTACGGACGTCTGACCAATAGGAACGTTCCCCTCACGGT
GCTCATCATGGCCATCATACTGTGGGCCATTGGCCTGCTAAATGGCACTT
ATCCGGCTATGTTCGCCTCCGGATCGCTGGTTTCTTGGATCTATCTCCGC
TTATATCAACACCATCCCCAATGGGCGTGGCGACAGCTACGGAAAGC
UFO03095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9536-RB | 1888 | CG9536-RB | 230..917 | 8..697 | 3340 | 99.1 | Plus |
CG9536-RA | 1944 | CG9536-RA | 230..917 | 8..697 | 3340 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6476221..6476746 | 533..8 | 2615 | 99.8 | Minus |
2L | 23513712 | 2L | 6475648..6475804 | 688..531 | 710 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:15:10 has no hits.
UFO03095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:53 Download gff for
UFO03095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9536-RA | 221..914 | 1..697 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:02 Download gff for
UFO03095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9536-RA | 224..917 | 1..697 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:55 Download gff for
UFO03095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9536-RA | 224..917 | 1..697 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:55 Download gff for
UFO03095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6475640..6475802 | 533..697 | 96 | <- | Minus |
2L | 6476222..6476752 | 1..532 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:02 Download gff for
UFO03095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6475640..6475802 | 533..697 | 96 | <- | Minus |
arm_2L | 6476222..6476752 | 1..532 | 99 | | Minus |