UFO03118.5prime Sequence
1156 bp (1051 high quality bases) assembled on 2009-02-03
> UFO03118.5prime
CAGTCGACATGAATACCACTTTTAAAATGGCTCGAACGAGCCTGAATCAT
TCTTGGCGGTTTGTTAGTAACAAAGCCAAGGGGCAATTTTCCAGTTTGCG
ACGATTACCAGCAGTTACCAGCCAAAATCGTCGCTACGCAGACCGATATA
CCTTCGACGACCAGACTCAAGCACAAATCCAGGGCATCAAGAAGATGAAA
GAGATGTCCGCGGTGCCCCGGGAGTCTCCTTGGCGTGACAGCGAATGGTC
TCCCGATTTTCCCGAGCGTTTGGATGAGTTGGGCTACGAGTCCCACTGCA
ACGATCGCCTCTATATAGCCAAGAACAAAATCCGTCACGAGCAACAAAAA
TATGAATTGGAACGTGAAGAGCGTCGCAAGCAGGCCCAACGAAGAATCAA
TAGTCACTTCGCTAAAGGTCAGGCAGAACCGGACTTATTGCGCCGGCGTA
CCATCTCACAGGATCCGGCCGATCACCAAAGGCGTCAGGAGGCGATTATC
GAACAGAATCGCCGTCGATGGCAAAATCGTCCGGAATCTAGGAGGGAAAC
TAATACCTCCGGCATTACCTATCGTCCGGTTAAGCGAAAGGAAACGTATA
TTGAGGAGGATATGCAAAGGGAATCGGAGGACTACCAGCGCCAAAGACGC
AATACAGAGAGCTCAGAGGAAGCTCAAGACAGCCAGACAGTGGTTTACGA
TTCCAATCGTCCCACTGCCGATTGGTTGAGGAAGCGCCAGGAGGAGAGCG
AGGCGGAGCACTGGCATTCGTGGCACACATGCCCATGCTCCCGGGAGTCG
GAGACCACAGAGGAGGTGAAGCCACATTTGAAGCGCAAGAAGGTGGTTGG
CATTCCGCCTGCATATCCAAGGGATTACCAACGACGCGGCTACCATCAGA
TATCCCCACCTGTGTATGCACTGAAAGCCAGACTATAGTGATGATACCAA
AGCGGCGACATCTGGCATCGATAGCAGTACCACAAGTTTGCCATGAAACA
GGTGGCTCTATGGCACAGGACTTCGACGCGATCAGGACACGGGCAACCAC
TCGATGCCAGGGCTGGGTGCCAGAAGGAGGAAGAGAAAGCCAGAAGAAGG
AGGAGCGTCATCCGGACCGCCCGTTTCGAATGTCGTCAGACGGTCCGTTA
CCTCCT
UFO03118.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5089-RA | 1664 | CG5089-RA | 221..1370 | 9..1138 | 5230 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16598968..16600055 | 9..1087 | 4965 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:31:29 has no hits.
UFO03118.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:08:08 Download gff for
UFO03118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5089-RA | 214..1357 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:03 Download gff for
UFO03118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5089-RA | 214..1357 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:04 Download gff for
UFO03118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5089-RA | 214..1357 | 1..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:04 Download gff for
UFO03118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16598961..16600104 | 1..1127 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:03 Download gff for
UFO03118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12486466..12487609 | 1..1127 | 97 | | Plus |
