UFO03140.5prime Sequence
1103 bp (1002 high quality bases) assembled on 2009-02-03
> UFO03140.5prime
CAGTCGACATGCAGAACTCCTTTCTTCCACTGAACACACGGCGTTTTCGA
CAGCGGGCCCAGGTGGAAACGCCGGATACGGTGTACTGGGACCGACTGGC
GAAACCAGAACTACTCAAGGAGCACAACACCATCGATTATTTGGACTTCA
GTCCAAGCGATCCTGACAACTTTGTTGTGACCTGTTCGGTGCGCGTTCAG
ATTTACAACCTGGTGACCATGCTTGTGGTAAAGAACCTTTCCCGATTCCA
AAAGACCGCATACGGCGCCACCTTCCGGCAGGATGGTCGACTCCTGGCCG
CCGGCGACGAGGAGGGCCATGTCAAGCTATTCGACACCACCAGTCGCAAC
ATCTTGCGTTTGTTCAAGGGACACACGGCACCAGTACACCGCACCTTCTT
TACGGCGGACAAGCTGCAGCTAGCCAGTTTTGGAGACGACAAGTCGGTCC
GTCTGTGGGACGTGGCAAACGAGAAGGTGGTGCAAACGTACGAGGACACG
CACACCGACTACGTTCGTGCAGGCGCCATGCATCCGCAGGCAGGGCATAT
GTTCGTCTCCGGCGGCTACGATGGCAAGATCAAACTGTACGATACGAGAG
CGGAAACGGCGGTGCAGCGCACCTTAGATCACGGAGCTCCGGTGGAGTCC
ATGTTGTTCCTTCCGAACGGCTCTATTTTCGTCAGCGCCGGCGGCAGCCA
GGTGCGCGTATGGGATCTCATCAGCGGCTGCCGTCTGCTCACCATGATGT
CGCAGCATCACAAAACAGTAACTTGTCTGCGACTGGGATCCGATGGCAGG
AGATTGCTCTCAGGCGGGCTCGATAGGCACGTGAAAATCTACGATGTGAG
CACCTACAAACAGTGCACACATTGACTTATCCCAATGCGTGGTCAGCATG
GCTGTTGCTGACGAGATCAGCAGTTGTGCTGGATGTCGATGGTCTAGTCT
CATCGTCGCATGATGTAGACAGCAGCCCAGTCATTTGAAAAGATCTGCGA
TCGCGCTCGAAAGTACTCGTGAGTACGAAACGCACGAACACACCAGGAGG
GTGATCCACCATCAGACCGTCAGGCTGATGATTCTAGATTGACTGCCAGT
TAA
UFO03140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3071-RA | 1921 | CG3071-RA | 60..1134 | 9..1064 | 4870 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2263056..2264011 | 101..1040 | 4045 | 97.8 | Plus |
| X | 23542271 | X | 2262896..2262988 | 9..101 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:09:15 has no hits.
UFO03140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:34 Download gff for
UFO03140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 47..1129 | 1..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:49 Download gff for
UFO03140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 52..1134 | 1..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:20 Download gff for
UFO03140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 52..1134 | 1..1064 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:20 Download gff for
UFO03140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2262888..2262988 | 1..101 | 96 | -> | Plus |
| X | 2263057..2264038 | 102..1064 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:49 Download gff for
UFO03140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2156921..2157021 | 1..101 | 96 | -> | Plus |
| arm_X | 2157090..2158071 | 102..1064 | 97 | | Plus |
