UFO03141.5prime Sequence
1140 bp (1036 high quality bases) assembled on 2009-02-03
> UFO03141.5prime
CAGTCGACATGCGGAAAATATACGACATACTGAAGAGGATGAGAGAAACG
GACAGTGGTTTCAATCCCCAGGAATTTGATACAGATGGCCTGGAAAATAG
TTTGGACTCGGATGGAGGCGAGGAAGGAGAGTCAGAAGAAGATGAGGCGG
AAGAAAACGTCACCGAGGGGGACATACTGGATGAAGACCTGGAGGAAGAC
ATTGCAACTCGACTGAAAGGCGTTGATATCAACGATGCGGATGAAGTTTG
GAGCCGGTTAACTACAGAGGAGCAAGATGAGTTCCAGAAATTGATCACCA
ATGGAGATATCATGAAGCTTATGCCAGACTACAAGCCCTGGTGGATCAAG
CCGAAGAACTCTAAGATTGTGATTATACCTACACCCGAAGAAGCTGCCAA
GAAAGAGAGCCGTGTTCCCGAAATTTTCGGGAGCATTGCCAAATTCTCCG
ATATATGCAAGAAAACTCCGTCTCCGTGCCTGCACTACAATTTGTGGAAC
ATACTAAGCGCCTACGCCTGTGTGGCTCGTTTCTTTGGCGGCGAACAGAG
GACCAATGCCAGCGAGGCAGTGGCCCACCTTGTCAATCTCAGCGCCACCT
TAAAGTACGGCACCAACTTCGAGGATGCTGAGGACGCTATTGTCTCCGTA
GAGATGGAAGCCATCACCACGGGTAATGGTCCTGCCGGCGCGGCTGCAGT
TGGAAGTGCTGCAGGAGGTGCCAATTTCCTCGTCGACAACAGGGAGCAGC
TGCAGCAGGATGCCCGCCAGTTGATGGCTACGAAGGAGCACAAGTTGGCC
GCCCTTAGTGATGTTCTCTATCTGCTGCAGCAGACGAAGGCAATCAGTCG
CCGTAAGATACCCAGGAAGCCGAGTTCCAGAGCTGTTCGCTTTGGCCAGC
GGAAGTGTGCATTGGATCGCACCAAACTGCGCAACTGGTTCGCAAATCGA
GTTTATGCTGTCGTATGTGGCGCGGGAAGAGTCCTGCAGCTTTCTAGACA
TTCGTTTGGCGCGCGGGCCCAGGTAGTGTCATAATCATAATCATATCATA
TCATAATCCCACTAGGCTAGGAGATCTGTCATGAACTAGTGCCTGATTCT
CACAATAAACGCCGGCGCAACGACGTTGAACAATCGAATG
UFO03141.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 257..1242 | 6..985 | 4780 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831442..20832421 | 6..980 | 4650 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:06 has no hits.
UFO03141.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:19 Download gff for
UFO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 186..1177 | 1..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:53 Download gff for
UFO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 251..1242 | 1..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:27 Download gff for
UFO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 251..1242 | 1..985 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:27 Download gff for
UFO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831436..20832427 | 1..985 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:53 Download gff for
UFO03141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657158..16658149 | 1..985 | 99 | | Plus |
