UFO03146.5prime Sequence
353 bp (249 high quality bases) assembled on 2009-02-03
> UFO03146.5prime
CAGTCGACATGCTTCGCAAATTTGGAGGTCTGTTGGCCCAGCAGGTGGGT
CAGCAAGCACGTTTCACCGCCGCGAGTCGCACATTTTCTTCGACAAAAGC
GCTGCACAAAGATCCAGCGACCCAGGAAGCAGAGGCGGCGCCACCGAAGA
ACATCCTTGTGGAAAAGGATAAGAACATCACGCTGATCGGCATCAATCGA
CCGCAGCAGCGTAATGCCATCGATTTCGCTTACTGCATCGCACCTTTTGC
GACGCCTTCCCCATTTCCAAGGCGAAAACACGTCCCCCGGGGGCGTGCTT
GACGGGGGGGGGGGTTCTTTTTGCCCCGGTTCCGACTCCTGGAAAATAAC
CCC
UFO03146.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5844-RA | 1355 | CG5844-RA | 84..419 | 8..343 | 1260 | 92.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12434415..12434640 | 110..336 | 675 | 89.5 | Plus |
3R | 32079331 | 3R | 12434242..12434345 | 8..111 | 505 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:55:12 has no hits.
UFO03146.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:36 Download gff for
UFO03146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5844-RA | 75..344 | 1..274 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:42 Download gff for
UFO03146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5844-RA | 75..344 | 1..274 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:38 Download gff for
UFO03146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5844-RA | 79..348 | 1..274 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:38 Download gff for
UFO03146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12434235..12434345 | 1..111 | 95 | -> | Plus |
3R | 12434417..12434608 | 112..303 | 91 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:42 Download gff for
UFO03146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8259957..8260067 | 1..111 | 95 | -> | Plus |
arm_3R | 8260139..8260330 | 112..303 | 91 | -> | Plus |