UFO03151.5prime Sequence
1147 bp (1048 high quality bases) assembled on 2009-02-03
> UFO03151.5prime
CAGTCGACATGGACGAGAAGCTAAAATATTCTCTGCTGCGCGGGGAACTG
GTGGACACGCAGAGCATTTGGACCAGGCATGAGAAGCGTGTCTGGTTCAT
CACCCTTATTACGGGCACCTGTATGCTGTACTCCACCCGCACCACTATGC
CACTTCTTGTGCCGGCCGTGGCATCCGCCCAAAAGTGGAGCAAAACCGAC
TCGGGCACTGTGCTCAGCTCCTTCTTCTGGGGCTACACACTCACGCAGGT
TGTGGGCGGCTACTTCAGCGACCGCTTTGGAGGCCAGCGAGTCATTCTGT
TTGCCGCAATCGGCTGGTCGCTTATCACATTCCTAATGCCCACTATCATC
TGGACGGCGGGCTCCATCAAGAGTTACGCTATTCCCTTCATTGTTGCCAT
TCGAATCCTGAACGGCGCTCTTCAGGGCGTGCACTTTCCTAGCATGATTA
GTCTAACCAGTCAGAATTTGTGCCCCAATGAGAGAAGCAGCTTCTTTGGG
CTGCTCACAGCGGGATCGGCTCTAGGTACTCTTCTGACTGGGATTATGGG
ATCTTTTCTGCTGGACTACTTCGGCTGGTCGTATGTATTCCGGGTGATAG
GACTGATGGGCATCGCATGGGCGCTGGTGCTGCGCTACTATGCAATGGCC
GGCGAGCGAAACCGAATCATTAATATTGCCACGCCATCCCGACTGTGCGC
GAACAAGAGTCCGGCAGAGACGTCAGCCGTGCCTTGGTTGCGATACTTTC
GTAGGCTGTCCTTCTGGGCCTGTGTGCTGACTCACGCCTGCGAGATGAAC
TGCTTCTTCGTGCTACTCTCCTGGCTGCCTACATACTTCCACGACGGCTT
TCCACACGCCAAGGGTTGGGTAGTGAACATGATCCCGTGGCTTGCCCTGC
CACCGTGCACGCTATTCGCCAAGTACTTGACCACCAGATTACTCGCTCGC
GAATGGCACACGACGACGTGCGCAAGTCATCCAAAGTTGCTGCTTTGCCG
CTCAGAATCTGGCCCTGTTTGTGATGAGCCGCACCTCGACTCCATACGGG
CTCATCTGCATGACCATTATCATTGGCGGCACGGGCTTCCAACAACAACG
CGGTAACAGTGATCCAAGACCTGCACCTCTCGCATTCGGACGCCCTT
UFO03151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MFS18-RA | 1846 | CG15438-RA | 208..1346 | 8..1139 | 5440 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4447200..4447854 | 1112..462 | 2985 | 98.8 | Minus |
| 2L | 23513712 | 2L | 4447906..4448296 | 464..74 | 1955 | 100 | Minus |
| 2L | 23513712 | 2L | 4448359..4448428 | 77..8 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:49 has no hits.
UFO03151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:14 Download gff for
UFO03151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15438-RA | 203..1348 | 1..1139 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:09 Download gff for
UFO03151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS18-RA | 201..1346 | 1..1139 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:06 Download gff for
UFO03151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS18-RA | 201..1346 | 1..1139 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:06 Download gff for
UFO03151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4447178..4447851 | 465..1129 | 98 | <- | Minus |
| 2L | 4447906..4448293 | 77..464 | 100 | <- | Minus |
| 2L | 4448360..4448433 | 1..76 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:09 Download gff for
UFO03151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4447178..4447851 | 465..1129 | 98 | <- | Minus |
| arm_2L | 4447906..4448293 | 77..464 | 100 | <- | Minus |
| arm_2L | 4448360..4448433 | 1..76 | 94 | | Minus |
