Clone UFO03152 Report

Search the DGRC for UFO03152

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:31
Well:52
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptSpp-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03152.5prime Sequence

271 bp (183 high quality bases) assembled on 2009-02-03

> UFO03152.5prime
CAGTCGACATGGCGGAGGAAGTCATCGGAACCGTTAAGGAGGTGCTGAAG
GGCATCATCGAGAATGTGAACGCGCCGAAGAACGAGTCGGCTCCGGGCGA
GAAGAAGCCCTCGACTCCGGAGGGCATGGCGGTGGCCTACAGCAGCCTGG
TGGTGATGGCCATGCTGCCCATCATCTTCGGCTCATCCGCTCCGTGAAGC
TGCACAAGCTGAAAAAGTCAACGGGCCGAGAAGGCGGACACGATGACAAG
AAGGACCCCTGTACTTCCCCT

UFO03152.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
Spp-RA 1736 CG11840-RA 111..374 8..269 1165 97 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 544333..544543 217..8 975 98.6 Minus
Blast to na_te.dros performed on 2014-11-28 19:55:05 has no hits.

UFO03152.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:13 Download gff for UFO03152.5prime
Subject Subject Range Query Range Percent Splice Strand
Spp-RA 77..351 1..271 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:38 Download gff for UFO03152.5prime
Subject Subject Range Query Range Percent Splice Strand
Spp-RA 103..377 1..271 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:34 Download gff for UFO03152.5prime
Subject Subject Range Query Range Percent Splice Strand
Spp-RA 103..377 1..271 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:34 Download gff for UFO03152.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 544333..544546 1..217 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:38 Download gff for UFO03152.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 544333..544546 1..217 96   Minus