UFO03153.5prime Sequence
1132 bp (1003 high quality bases) assembled on 2009-02-03
> UFO03153.5prime
CAGTCGACATGCCGCACAACAACCAGCCGTCTCCCGGGGATGATCAGTTG
GGACCGCCAAAGGCGGACTTCAGTGCTCCGCCACCGTACGAGGCGAACGT
TGGCCATGGCCAGCAGGTAGCACTGCCGGCTCAGATGCCACCGCTGGCCT
TGGCCACACCCGATCCCAGTCAGATCCCGATACAGATGCAAGTGCAGCTG
CCGAGCCAGGCGGACCTTATGAATGCACAACTGCCGCCAGAAATACACGG
GAAGTTGCCCACGTACGAGGAGGTTCAAATGGAAAAGTCGCTGAACGGAG
AGCTGCCGCCCGCCTTTTTGACTTTACCCTCCTCGCAGCAGCTACCGCCG
CCGCCGAATCCGCTACTGCCGCCAAATCCGCTGCGCGATGGAGCCGCTGC
TGTGCGATCTGCCCAGCCGGCACTCACGTTCATCGCCATCGATGCCAGCG
ATCCGGAAAATAGTCTGTCCACCACCGACAACTTGCTCGGCACGGACATC
ATGTTCATCACGGCCTTCATTGTGGCCTTTTTGTTTAACTGGATCGGCTT
CCTGATGCTCACCTGTTTCTGTCACACAATCGCCGCCCGATATGGAGCAT
TGTCGGGATTCGGATTGTCGCTGGCTAAATGGACGCTGATCGTGAAGCAC
TCGACGGACTTGGCCTCGCACGAAAACTCCTGGCTCTGGTGGCTGATCTG
TGCCTTTGGCTTCCTGATCAGCATACGCGCTTTAATACAGTATGTCAGCA
TCAAGCGATCGTGGCGCCTCCTTTCCGCCTCTGCCCAGGACGGCTGCTAT
TCTTTTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGTCATACTG
GATCTATCACAGGAGTCAGCGAGCTCGATATCAATACGCCCCGCCCTGCC
ACTCATCGCAGTACTTGTGTATTCATTAGCATTCTGGCGACTGAGCATCC
AACGCATGATGACCTGATTGCACGGATCGACC
UFO03153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1092 | 8..808 | 3985 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648444..17649245 | 808..8 | 3960 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:45:57 has no hits.
UFO03153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:13 Download gff for
UFO03153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 282..1088 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:47 Download gff for
UFO03153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 286..1092 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:21 Download gff for
UFO03153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 286..1092 | 1..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:21 Download gff for
UFO03153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648444..17649249 | 1..808 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:47 Download gff for
UFO03153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641544..17642349 | 1..808 | 99 | | Minus |
