UFO03185.5prime Sequence
1088 bp (958 high quality bases) assembled on 2009-02-03
> UFO03185.5prime
CAGTCGACATGCCCAAGGAAGAAGCGGAGCCATCGGCGAGTGGTCTTGCG
GTGGCCGCCAAGCAAAACGATGTGCCATCCGCGGAAAACTCGAATCACAA
GGAAAGCGACGCATACGCCTCCGCCTCTGCCAGCGCCAGTAGCGCCTCGA
CCACGCCCCCACCCGCCCAGGAAGACGCCGAGGAGGCGGAGCTGCTGGAG
CGTATGCGCGGCGATGCAGTCGGCAACACCATGTACAGCAGTCGATTCAT
CCTGAAAACGGTGATGAGGGTGGGAGAATTACTGCGGCATTCAACACTGG
ATCAGCAGCTGGAGGATGACCTGTGCAAAGTGTGGGACATGTCGGTGTCC
CCCGAAGTGGTCACACTGCTGCTGGAGAACGGAGCCATTGATCCGATCAT
GTACACCCTGGTGGCGGGCTGTGAAGATGTGCGGCTCTACGAGATTCTTA
TCGGACTGCTGGGCAATATGTGCGCCCAGGTGGAGTGCGCAGAGATATTG
GCCTGTGACCGCTACACGTTGGAAACCCTGTTCAAGATGACATACTGCAT
GGACACCGCCATGTTGATACAGCTGATGCGACTCTTTCAGTACATCATGG
CCCATGTGCTTAGCGGCAAGGAGAAGTTCGCTGTGAACTGGTACATCTGC
TTTGCTGCCTTTGAGAACTCCGCGCAGAACCTGGGCAGGATATTGCAACT
GTCCGTTAGCGATGAACTGCTAGTAGCTGCACTGAAAGCCACAAATGCTG
TGCTGGCCAGTTGCGCCTTGGTGGAGGAGGAAAACGCAAACTCCACGTTG
AATCTAAAGCCTTTTGCGGAGGTCTTTCTAGTGCCAGAACTCTGCGAGGG
GGTCAATAGCGCGTTTTTGCGACTCATGCGCGATGATCAGACAAAATTGA
CCGACGAGGAAGCTGGCGAGGACACGAGATGCAGAGTGCAGCGGCCACGA
CAGTGATGAGATGCGACGTCGGTTACGACTCGTGCGACAAAATACTGTGA
TGTGAGATCATACACTACTCAATAATTGCACATTCTGTCACTGCTAAGCC
AGCCTCATGATGTGATGGCACCAGTATGTCAGTGCTAA
UFO03185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30467-RA | 1782 | CG30467-RA | 135..1186 | 4..1037 | 4790 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15538309..15539229 | 4..924 | 4575 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:29:38 has no hits.
UFO03185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:43 Download gff for
UFO03185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30467-RA | 93..1109 | 1..1004 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:03 Download gff for
UFO03185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30467-RA | 131..1147 | 1..1004 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:12 Download gff for
UFO03185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30467-RA | 131..1147 | 1..1004 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:12 Download gff for
UFO03185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15538305..15539335 | 1..1015 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:03 Download gff for
UFO03185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11425810..11426840 | 1..1015 | 98 | <- | Plus |
