Clone UFO03189 Report

Search the DGRC for UFO03189

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:31
Well:89
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptTwdlT-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03189.5prime Sequence

386 bp (385 high quality bases) assembled on 2009-02-03

> UFO03189.5prime
CAGTCGACATGAAAGCCTTCATCCTAATGTCCTGCCTGGCGCTGGCCGCC
GCTCGTCCTGAAGCCGGATACAACTACAACCGTCCTGGTGGCGGCGGTGG
CTCTGGCGGCGGCTCCGGCGGTGGCCTGGGCGGTGGATTCGGAGGTGGCT
CCAGCGGCGGCTTCGGCGGCGGTATTGGTGGAGGATTCGGTGGTGGATTC
GGCGGTGGCAGCGGCGGAGGAGGATTCAGCAGCGGCGGAGGCGGTGGCTT
CAGCAGCGGCGGTGGTGGAGGCGGAGGCGGTGGATTCGGCGGTGGATTCG
GAGGCGGCTCCGGCGGCGGCTCCGGCGGCGGTTTCGGCGGAGGTGGCAGC
ATTGGCGGATTCGGAGGCGGCGGCGGTGGTGGTGGT

UFO03189.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
TwdlT-RA 1607 CG5812-RA 190..568 8..386 1895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27049511..27049848 8..345 1690 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:09:26 has no hits.

UFO03189.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:02:41 Download gff for UFO03189.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlT-RA 181..563 1..386 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:59 Download gff for UFO03189.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlT-RA 186..568 1..386 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:29 Download gff for UFO03189.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlT-RA 186..568 1..386 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:29 Download gff for UFO03189.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27049507..27049845 1..342 99 -> Plus
3R 27049922..27049965 343..386 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:59 Download gff for UFO03189.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22875229..22875567 1..342 99 -> Plus
arm_3R 22875644..22875687 343..386 100   Plus