UFO03202.5prime Sequence
1146 bp (1049 high quality bases) assembled on 2009-02-03
> UFO03202.5prime
CAGTCGACATGTCGGAATCAACCGATCCCCATTGCGCCACCTCCAAGTCC
AACCTGATCAAGGTGAACCACGTGGGGGTGACGGCCAAGCTGCAGTCTCC
CCTGAAGAAGATCTTCCCACGGCTGAACTCCTCCAGCGATTCCGACGCAT
ATCAGCACAGTCAGACGCAGTACAACATGTTCAAGGATGTGGCGCACGGG
GAAATGACCGCGTCCACGGATTCGGGGAGCTCACCACACACTCTGTACGA
GATGCACGCTGAGCCGGGGAAGAGTCAGCTTAGCCTGAGCAAGAGCAAGC
CCCAAAGGATCGAGTTCCAGCGTTACTCCAAGCGCCGTCCCCGTGTGCTC
GTCCCAACGAGAACTGCGCCGAAAGTGAAGGGTCGTGCCACAAAGTCCCA
CAAATCATCGCAGGCGCAGAAGCAGAAGCAGAAGAGTGGCTTTCTAGCCC
GTTTAGTGGAGTCGCTGGACAAGATGTGCAAGTGCCAGCCGCAGAGCCGA
AATTCCATCATCGACGATCTGCCGGAGCCACAGTGGAATCGCAAGGAGGC
CAACCGGCACACCTGCATCGGCATCTATCCCTTCGAGCATGGCTGCGCCG
ACTATCTGAGCACCACGGACTCGCATCCGAAGATCAATGCTATTGTCCTG
GCCGACCGCGCCACCACCTATGCCACCCACTTCTGGGCGGAGCTCTTCGG
ACTGCTGCACATCGCCGTGGCCTTCGTGGTAGCCTTCATTCTGCAGAGCT
ACCGATTTGTCCTCTACTCCCTGGTGAACACCCTGATCGTTGGACTGCTC
CACATGACCTCCGACTACTTGCTCAAGCCCCTCCTGACCATGCTCTTCAA
CGGCTACCTGCAGCCACCACTGATTTTCCTATACAATGTACTGTGCTCCG
CCAGGGACATCCTCGATCCGGTGGCCACCACCCTGAACAACTTGATGAAA
CCGCTGGCCACGGTGGGCGGCAGTATACGATTGGTGGACGTCACTATCGC
AGGTCCATAAGCTGGCCAAAGAGTTGCAAGCTTTCTAGAACATCGTTTGG
CGCCGCCGGGCCCAGTAGTGGTCATATTCATATCATATCATAATCTAATT
CCCACTAGCCCTAGGAGATCCTGGCCATGGACATGCCTGAATCTCA
UFO03202.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3698-RA | 1135 | CG3698-RA | 25..1041 | 9..1023 | 5035 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20797335..20798351 | 1023..9 | 4985 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:21:13 has no hits.
UFO03202.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:47 Download gff for
UFO03202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3698-RA | 17..1041 | 1..1023 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:51 Download gff for
UFO03202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3698-RA | 17..1041 | 1..1023 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:45 Download gff for
UFO03202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3698-RA | 17..1041 | 1..1023 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:45 Download gff for
UFO03202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20797335..20798358 | 1..1023 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:51 Download gff for
UFO03202.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20790435..20791458 | 1..1023 | 99 | | Minus |
