UFO03217.5prime Sequence
1139 bp (1022 high quality bases) assembled on 2009-02-03
> UFO03217.5prime
CAGTCGACATGAGTTGCTACAGAAAAAGGCACTTTCTATTGTGGCTCTTG
CGTGCTGTGTGTATGTTGCACTTAACCGCGAGAGGGGCATATGCCACAGT
TGGGTTGCAAGGAGTGCCGACATGGATATATCTCGGCCTCAAGTCCCCCT
TCATCGAGTTTGGCAACCAGGTGGAGCAGCTGGCCAATTCCAGCATACCA
CTGAACATGACCAAGGACGAGCAGGCCAATATGCATCAAGAGGGCCTACG
CAAGCTCGGTACGTTCATAAAGCCAGTGGACCTGCGGGACTCGGAGACTG
GCTTCGTCAAGGCCGATCTCACCAAGAGACTGGTATTCGATAGACCGAAC
AACATTACATCTCGCCCTATTCACCCGATACAGGAGGAGATGGATCAGAA
GCAGATAATCCTGCTCGACGAGGATACCGACGAGAATGGCCTGCCAGCCA
GTCTCACCGACGAGGATCGCAAGTTTATAGTGCCGATGGCGCTCAAGAAT
ATATCGCCCGATCCACGCTGGGCGGCCACTACACCGAGTCCCTCCGCTTT
GCAGCCGAACGCTAAAGCCATCTCGACCATTGTGCCCTCGCCTCTGGCCC
AGGTCGAGGGGGATCCCACGTCCAACATCGATGACCTGAAGAAGCACATA
CTCTTCTTGCACAACATGACCAAGACCAATTCGAACTTCGAGTCGAAATT
CGTTAAATTCCCGAGCCTGCAAAAGGACAAGGCCAAGACATCGGGAGCTG
GCGGTTCGCCGCCCAATCCCAAGCGGCCCCAGCGGCCGATTCATCAGTAT
TCCGCGCCCATAGCCCCACCAACACCCAAGGTGCCCGCGCCAGATGGCGG
CGGCGTAGGAGGAGCAGCTTACAATCCCGGAGAGCAGCCAATTGGTGGCT
ACTATCAGAACGAGGAACTAGCGAAAATCAATCCCTTCTTAAACCAACAG
ATACCGACTCCCATCAGCGGCCGGCGGTAGCAGCCATGGCCAGAAGAATC
CCAGCGAGCCCAAGGTGATACTGCTCACGAGACACTCTCACGGAGACCTC
AATCGAGCGGATCGGAGTCCATCGATAAACCAGCCAGGGGGATCGCCTGG
CCGGCCCAACAAGCGAACACTTGCCTGCCATTCCGAGTT
UFO03217.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 4005 | CG6407-RB | 554..1682 | 9..1128 | 5295 | 98.5 | Plus |
| Wnt5-RA | 3850 | CG6407-RA | 554..1682 | 9..1128 | 5295 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18503771..18504852 | 1085..9 | 5130 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:47:54 has no hits.
UFO03217.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:27 Download gff for
UFO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 544..1650 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:13 Download gff for
UFO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 546..1652 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:28 Download gff for
UFO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 546..1652 | 1..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:28 Download gff for
UFO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18503750..18504859 | 1..1101 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:13 Download gff for
UFO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18397783..18398892 | 1..1101 | 98 | | Minus |
