UFO03221.5prime Sequence
1094 bp (983 high quality bases) assembled on 2009-02-03
> UFO03221.5prime
CAGTCGACATGACGTCGCAAGTGCCGTGCTACACGATAATCAACTCGCCG
GACCTGGAGGTGACCAACGAGATGCAACTGAAGCGCGATCTCGAAAAGGG
CGACACGAACGTGAAGATCGAGACGCTGAAGCGGGTAATCAAGTTGCTGC
TGAATGGGGAGCGGTATCCGGGCCTGATCATGACCATCATACGCTTCGTC
CTGCCGGTGCAGAACCACACGATCAAGAAGCTGCTGCTCATCTTCTGGGA
AATTGTGCCGAAGACATCGGCGGATGGGAAGCTGCTGCAGGAGATGATAC
TGGTGTGCGATGCGTACAGGAAGGATTTGCAGCATCCCAATGAGTTTCTG
CGCGGCTCGACACTGCGCTTCCTCTGCAAGCTGAAGGAGCCGGAGCTGCT
GGAGCCACTGATGCCGGCCATACGGGCGTGCCTGGATCACCGGCACTCGT
ATGTGCGACGAAATGCCGTGCTGGCCATCTTTACCATCTACAAGAACTTC
GATTGGCTGGTGCCCGATGGGCCGGAGCTGATTGCCAGCTTCCTGGACAC
GCAGCAGGACATGAGCTGCAAGCGCAACGCCTTCCTTATGCTACTGCATG
CGGACCAGGAGCGAGCGCTCAACTATCTGGCCAGTTGCATCGATCAGGTG
CACACTTTCGGCGATATACTGCAGCTGGTCATCGTGGAGCTGATCTATAA
AGTGTGCCATGCCAATCCCGCCGAGCGTTCGCGGTTCATACGCTGCATCT
ACAACCTGCTGAACTCCAGCTCGAATGCGGTGCGTTACGAGTCCGCTGGC
ACATTGATTACGCTCTCGCTGGCGCCCACGGCCATCAAGGCGGCGGCCAG
TTGCTACATCGAACTGGTGGTCAAGGAGAGCGACAACAACGTCAGCTAAT
CGTGCTCGATCGCCTGTGCCATGAGGAGCACGAGGCATGAGAGGTGATGC
AGATCTGGTGATGGACGTTCTGCGCGTCCTGCCGCACCAGACATCGAAGG
TGGCGCCAGAAAACACTCCGCGCTGCCCTGACTGTTATTCCGGTATATTG
CGAATGGTGCTGTCCTCCAGAGGAGGTGCCAAACGCCAATGTGG
UFO03221.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaCOP-RA | 3203 | CG6223-RA | 150..1254 | 9..1094 | 4835 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18384096..18385093 | 997..9 | 4550 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:48:41 has no hits.
UFO03221.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:24 Download gff for
UFO03221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCop-RA | 95..1135 | 1..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:44 Download gff for
UFO03221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCop-RA | 95..1135 | 1..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:31 Download gff for
UFO03221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCOP-RA | 142..1182 | 1..1033 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:31 Download gff for
UFO03221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18384059..18385101 | 1..1033 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:44 Download gff for
UFO03221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18278092..18279134 | 1..1033 | 97 | | Minus |
