UFO03229.5prime Sequence
1130 bp (1024 high quality bases) assembled on 2009-02-03
> UFO03229.5prime
CAGTCGACATGTCGTTCATCACACGGGAATACAAGTTTGAGAGCAGCAAG
GTGATGGAGCCGAAATCAGATCAGCACACGATGGCCATGCGGAGTCTGAG
GAAACTGGTCAAACCCCTTCTGCGACTGGTGAAGAAGAAGCAGCTACTCC
GGAAGACTCTGGCCGAGATCCAGAACCAAAATGCAGTCAACGCCTCGCTG
GAGGACATGCGCAAAGATCCGGCGGCCAGTTGCGATAACATGGCCAACGA
GGAGCTGGAGCAGCGACTGTACACCGATCTCCGCCAGTGCCCCACCAACG
TGGCCATGATCGTGCAGCAGGGTCAGCAACAGAGCATCGTGCCCGTCCAT
CCGGAGCAGACCTTCATCCCGGTCCACTTCGCCCGCACCACCAGCGGCAC
CTTCTTCTGGACCTCAGCCGAGGGAGCTCGCCAGCACCACGAACAGCAGT
TGCGCCAGCAGTTCGACCGTTGGGTTCAGGCCGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAAGCCATCACAAACGGCAT
GATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAA
TATTTGCCCATGGTGAAAACGGGGCGAAGAGTTGTCCATATTGGCCACGT
TTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACA
TATCTCAATAAACCCTTTAGGGAAATAGCCAGGTTTCACGTACACGCCAC
ATCTGCGAATATATGTGTAGAACTGCCGGAAATCGTCTTGTATTCCCTCC
GAAGCGATGAAACGTTCAGTGCTCAATGAACGGTGTACAGGTGAACCTTC
CATATCACAGCTCACGTCTTTCATGCATCG
UFO03229.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tom-RA | 963 | CG5185-RA | 84..557 | 9..482 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14969427..14969900 | 9..482 | 2370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:15:27 has no hits.
UFO03229.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:07:11 Download gff for
UFO03229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom-RA | 74..557 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:12 Download gff for
UFO03229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom-RA | 77..560 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:55:04 Download gff for
UFO03229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom-RA | 77..560 | 1..486 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:55:04 Download gff for
UFO03229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14969420..14969900 | 1..482 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:12 Download gff for
UFO03229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14962520..14963000 | 1..482 | 99 | == | Plus |
